Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC4A11Q8NBS3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC4A11Q8NBS3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.11■□□□□ 0.65
SLC4A11Q8NBS3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC4A11Q8NBS3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC4A11Q8NBS3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.11■□□□□ 0.65
SLC4A11Q8NBS3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.11■□□□□ 0.65
SLC4A11Q8NBS3 MIR3180-1-201ENST00000580374 94 ntBASIC19.11■□□□□ 0.65
SLC4A11Q8NBS3 MIR3180-3-201ENST00000584616 94 ntBASIC19.11■□□□□ 0.65
SLC4A11Q8NBS3 AL353801.3-201ENST00000609898 542 ntBASIC19.11■□□□□ 0.65
SLC4A11Q8NBS3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC4A11Q8NBS3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SLC4A11Q8NBS3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC4A11Q8NBS3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC4A11Q8NBS3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC4A11Q8NBS3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC4A11Q8NBS3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 KRT18P55-202ENST00000578578 1546 ntBASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC4A11Q8NBS3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 KRT18P1-202ENST00000452408 1331 ntBASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 AP002414.4-201ENST00000589764 1148 ntBASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 AC093458.2-201ENST00000623150 629 ntBASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 AC008764.6-201ENST00000595909 2069 ntBASIC19.09■□□□□ 0.65
SLC4A11Q8NBS3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLC4A11Q8NBS3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC4A11Q8NBS3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC4A11Q8NBS3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC4A11Q8NBS3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLC4A11Q8NBS3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLC4A11Q8NBS3 NOC2LP2-201ENST00000407594 1944 ntBASIC19.08■□□□□ 0.65
SLC4A11Q8NBS3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC4A11Q8NBS3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.08■□□□□ 0.65
SLC4A11Q8NBS3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC4A11Q8NBS3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 ATP5G2P1-201ENST00000433580 426 ntBASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 TPSP2-201ENST00000561760 610 ntBASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC4A11Q8NBS3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms