Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TTC9CQ8N5M4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.27□□□□□ -0.12
TTC9CQ8N5M4 AL391807.1-203ENST00000604392 2365 ntBASIC14.27□□□□□ -0.12
TTC9CQ8N5M4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TTC9CQ8N5M4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.27□□□□□ -0.12
TTC9CQ8N5M4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.27□□□□□ -0.12
TTC9CQ8N5M4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TTC9CQ8N5M4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.27□□□□□ -0.12
TTC9CQ8N5M4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TTC9CQ8N5M4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TTC9CQ8N5M4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.27□□□□□ -0.12
TTC9CQ8N5M4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
TTC9CQ8N5M4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
TTC9CQ8N5M4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TTC9CQ8N5M4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TTC9CQ8N5M4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TTC9CQ8N5M4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TTC9CQ8N5M4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TTC9CQ8N5M4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 FAM8A6P-201ENST00000407496 1135 ntBASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 TSPY5P-201ENST00000426936 936 ntBASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 HOMER2P1-201ENST00000455653 964 ntBASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 AC024563.2-201ENST00000603282 481 ntBASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TTC9CQ8N5M4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 KRT18P57-201ENST00000443599 1254 ntBASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 AL136038.4-201ENST00000603606 1261 ntBASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 AP000997.3-201ENST00000623333 2250 ntBASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TTC9CQ8N5M4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms