Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 AC007967.2-201ENST00000432613 625 ntBASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 AC112698.1-201ENST00000510299 916 ntBASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 UNC93B6-202ENST00000528242 690 ntBASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 AC040169.1-201ENST00000565382 521 ntBASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 AC107918.4-202ENST00000641623 219 ntBASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.85■□□□□ 0.45
TMEFF1Q8IYR6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 AC005082.1-201ENST00000413042 2259 ntBASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 RNA5SP416-201ENST00000516838 111 ntBASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 AP001160.2-201ENST00000596071 487 ntBASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEFF1Q8IYR6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms