Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 AC079602.3-201ENST00000623931 403 ntBASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 AC132938.6-201ENST00000623828 1655 ntBASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE9Q8IYJ1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE9Q8IYJ1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 AC006011.2-201ENST00000621313 1158 ntBASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE9Q8IYJ1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.83■□□□□ 0.45
CPNE9Q8IYJ1 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.83■□□□□ 0.45
CPNE9Q8IYJ1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.83■□□□□ 0.45
CPNE9Q8IYJ1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.83■□□□□ 0.45
CPNE9Q8IYJ1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE9Q8IYJ1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE9Q8IYJ1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE9Q8IYJ1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE9Q8IYJ1 AC134043.2-201ENST00000624206 2238 ntBASIC17.83■□□□□ 0.45
CPNE9Q8IYJ1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE9Q8IYJ1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE9Q8IYJ1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE9Q8IYJ1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CPNE9Q8IYJ1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CPNE9Q8IYJ1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms