Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 AC098818.2-201ENST00000564925 2320 ntBASIC20.05■□□□□ 0.8
TRIM50Q86XT4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 AC120114.3-201ENST00000611923 658 ntBASIC20.05■□□□□ 0.8
TRIM50Q86XT4 AL355877.3-201ENST00000622820 899 ntBASIC20.05■□□□□ 0.8
TRIM50Q86XT4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM50Q86XT4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 KRT18P67-201ENST00000432816 1264 ntBASIC20.04■□□□□ 0.8
TRIM50Q86XT4 FGFR3P6-201ENST00000457012 610 ntBASIC20.04■□□□□ 0.8
TRIM50Q86XT4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 AL773604.1-201ENST00000617417 272 ntBASIC20.04■□□□□ 0.8
TRIM50Q86XT4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TRIM50Q86XT4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms