Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC28Q86X40 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LRRC28Q86X40 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC28Q86X40 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRC28Q86X40 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC28Q86X40 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LRRC28Q86X40 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC28Q86X40 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC28Q86X40 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LRRC28Q86X40 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC28Q86X40 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC28Q86X40 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC28Q86X40 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.07■□□□□ 0.16
LRRC28Q86X40 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC28Q86X40 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC28Q86X40 C2orf69P3-201ENST00000565542 1120 ntBASIC16.07■□□□□ 0.16
LRRC28Q86X40 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.07■□□□□ 0.16
LRRC28Q86X40 AC145285.6-201ENST00000604632 637 ntBASIC16.07■□□□□ 0.16
LRRC28Q86X40 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC28Q86X40 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LRRC28Q86X40 CYP2D8P-201ENST00000433633 1490 ntBASIC16.07■□□□□ 0.16
LRRC28Q86X40 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC28Q86X40 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC28Q86X40 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LRRC28Q86X40 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC28Q86X40 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRC28Q86X40 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRC28Q86X40 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRC28Q86X40 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC28Q86X40 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC28Q86X40 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC28Q86X40 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC28Q86X40 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC28Q86X40 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC28Q86X40 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC28Q86X40 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC28Q86X40 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC28Q86X40 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC28Q86X40 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC28Q86X40 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC28Q86X40 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC28Q86X40 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC28Q86X40 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LRRC28Q86X40 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC28Q86X40 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC28Q86X40 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC28Q86X40 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LRRC28Q86X40 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC28Q86X40 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC28Q86X40 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC28Q86X40 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC28Q86X40 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC28Q86X40 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC28Q86X40 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC28Q86X40 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC28Q86X40 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
LRRC28Q86X40 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC28Q86X40 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC28Q86X40 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC28Q86X40 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.06■□□□□ 0.16
LRRC28Q86X40 MFAP1P1-201ENST00000442257 1255 ntBASIC16.06■□□□□ 0.16
LRRC28Q86X40 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC28Q86X40 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC28Q86X40 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC28Q86X40 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC28Q86X40 AC010947.1-201ENST00000623454 693 ntBASIC16.06■□□□□ 0.16
LRRC28Q86X40 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC28Q86X40 AC011676.5-201ENST00000624864 2660 ntBASIC16.06■□□□□ 0.16
LRRC28Q86X40 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC28Q86X40 AC022211.2-201ENST00000585075 2527 ntBASIC16.06■□□□□ 0.16
LRRC28Q86X40 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC28Q86X40 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC28Q86X40 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LRRC28Q86X40 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC28Q86X40 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC28Q86X40 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC28Q86X40 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 KRT8P32-201ENST00000512863 1461 ntBASIC16.05■□□□□ 0.16
LRRC28Q86X40 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 LINC01568-207ENST00000641790 1380 ntBASIC16.05■□□□□ 0.16
LRRC28Q86X40 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms