Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 AC084018.2-201ENST00000613093 2607 ntBASIC18.65■□□□□ 0.58
CCDC25Q86WR0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC25Q86WR0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC25Q86WR0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC25Q86WR0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC25Q86WR0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC25Q86WR0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC25Q86WR0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC25Q86WR0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC25Q86WR0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC25Q86WR0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC25Q86WR0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC25Q86WR0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 AP000692.2-201ENST00000608391 879 ntBASIC18.64■□□□□ 0.57
CCDC25Q86WR0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC25Q86WR0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 MIR149-201ENST00000384879 89 ntBASIC18.63■□□□□ 0.57
CCDC25Q86WR0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 FSCN1P1-201ENST00000568912 1481 ntBASIC18.63■□□□□ 0.57
CCDC25Q86WR0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC25Q86WR0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 AD000864.1-201ENST00000624076 2295 ntBASIC18.62■□□□□ 0.57
CCDC25Q86WR0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 MESTP1-201ENST00000404287 994 ntBASIC18.62■□□□□ 0.57
CCDC25Q86WR0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 KRT18P6-201ENST00000555540 1265 ntBASIC18.62■□□□□ 0.57
CCDC25Q86WR0 SLC25A1P4-201ENST00000567977 778 ntBASIC18.62■□□□□ 0.57
CCDC25Q86WR0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 KRT18P55-202ENST00000578578 1546 ntBASIC18.62■□□□□ 0.57
CCDC25Q86WR0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 AC093010.1-201ENST00000473625 1624 ntBASIC18.62■□□□□ 0.57
CCDC25Q86WR0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CCDC25Q86WR0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms