Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 MIR564-202ENST00000385049 94 ntBASIC22.08■■□□□ 1.13
USP48Q86UV5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
USP48Q86UV5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
USP48Q86UV5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC22.08■■□□□ 1.13
USP48Q86UV5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
USP48Q86UV5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
USP48Q86UV5 PIN1-206ENST00000587625 878 ntTSL 2 BASIC22.08■■□□□ 1.13
USP48Q86UV5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
USP48Q86UV5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC22.08■■□□□ 1.13
USP48Q86UV5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
USP48Q86UV5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC22.08■■□□□ 1.13
USP48Q86UV5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC22.08■■□□□ 1.13
USP48Q86UV5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
USP48Q86UV5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC22.08■■□□□ 1.13
USP48Q86UV5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
USP48Q86UV5 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
USP48Q86UV5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
USP48Q86UV5 AL353692.3-201ENST00000407031 1396 ntBASIC22.08■■□□□ 1.12
USP48Q86UV5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
USP48Q86UV5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC22.08■■□□□ 1.12
USP48Q86UV5 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
USP48Q86UV5 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
USP48Q86UV5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
USP48Q86UV5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
USP48Q86UV5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
USP48Q86UV5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
USP48Q86UV5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
USP48Q86UV5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
USP48Q86UV5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
USP48Q86UV5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
USP48Q86UV5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
USP48Q86UV5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
USP48Q86UV5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC22.07■■□□□ 1.12
USP48Q86UV5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC22.07■■□□□ 1.12
USP48Q86UV5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC22.07■■□□□ 1.12
USP48Q86UV5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
USP48Q86UV5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.07■■□□□ 1.12
USP48Q86UV5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
USP48Q86UV5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
USP48Q86UV5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
USP48Q86UV5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
USP48Q86UV5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
USP48Q86UV5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
USP48Q86UV5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC22.07■■□□□ 1.12
USP48Q86UV5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC22.07■■□□□ 1.12
USP48Q86UV5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
USP48Q86UV5 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
USP48Q86UV5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
USP48Q86UV5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
USP48Q86UV5 FEM1AP3-201ENST00000403722 1741 ntBASIC22.06■■□□□ 1.12
USP48Q86UV5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
USP48Q86UV5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
USP48Q86UV5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
USP48Q86UV5 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC22.06■■□□□ 1.12
USP48Q86UV5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
USP48Q86UV5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
USP48Q86UV5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
USP48Q86UV5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC22.06■■□□□ 1.12
USP48Q86UV5 AC139887.3-201ENST00000568585 713 ntBASIC22.06■■□□□ 1.12
USP48Q86UV5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC22.06■■□□□ 1.12
USP48Q86UV5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
USP48Q86UV5 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC22.06■■□□□ 1.12
USP48Q86UV5 BNIP3P18-201ENST00000593976 575 ntBASIC22.06■■□□□ 1.12
USP48Q86UV5 AL691403.2-201ENST00000618460 490 ntBASIC22.06■■□□□ 1.12
USP48Q86UV5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
USP48Q86UV5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC22.06■■□□□ 1.12
USP48Q86UV5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
USP48Q86UV5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
USP48Q86UV5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
USP48Q86UV5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
USP48Q86UV5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
USP48Q86UV5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
USP48Q86UV5 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC22.06■■□□□ 1.12
USP48Q86UV5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
USP48Q86UV5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
USP48Q86UV5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
USP48Q86UV5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
USP48Q86UV5 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
USP48Q86UV5 NOC2LP1-202ENST00000452600 2235 ntBASIC22.06■■□□□ 1.12
USP48Q86UV5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
USP48Q86UV5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
USP48Q86UV5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
USP48Q86UV5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC22.06■■□□□ 1.12
USP48Q86UV5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
USP48Q86UV5 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
USP48Q86UV5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
USP48Q86UV5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC22.05■■□□□ 1.12
USP48Q86UV5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
USP48Q86UV5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
USP48Q86UV5 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
USP48Q86UV5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC22.05■■□□□ 1.12
USP48Q86UV5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
USP48Q86UV5 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
USP48Q86UV5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
USP48Q86UV5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
USP48Q86UV5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
USP48Q86UV5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
USP48Q86UV5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
USP48Q86UV5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
USP48Q86UV5 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms