Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 FLJ13224-201ENST00000313737 1514 ntBASIC16.66■□□□□ 0.26
TUBA1AQ71U36 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 CKBP1-201ENST00000565489 1086 ntBASIC16.66■□□□□ 0.26
TUBA1AQ71U36 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBA1AQ71U36 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 AC096733.2-201ENST00000609937 1394 ntBASIC16.65■□□□□ 0.26
TUBA1AQ71U36 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.65■□□□□ 0.26
TUBA1AQ71U36 AC211429.1-201ENST00000415277 523 ntBASIC16.65■□□□□ 0.26
TUBA1AQ71U36 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 TSPY21P-201ENST00000433481 731 ntBASIC16.65■□□□□ 0.26
TUBA1AQ71U36 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 AP005242.2-201ENST00000580065 1175 ntBASIC16.65■□□□□ 0.26
TUBA1AQ71U36 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 AC011676.5-201ENST00000624864 2660 ntBASIC16.65■□□□□ 0.26
TUBA1AQ71U36 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.65■□□□□ 0.26
TUBA1AQ71U36 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1AQ71U36 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TUBA1AQ71U36 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
TUBA1AQ71U36 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.26
TUBA1AQ71U36 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBA1AQ71U36 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBA1AQ71U36 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBA1AQ71U36 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TUBA1AQ71U36 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms