Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.94□□□□□ -0.02
VPS13CQ709C8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS13CQ709C8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13CQ709C8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13CQ709C8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
VPS13CQ709C8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
VPS13CQ709C8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13CQ709C8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
VPS13CQ709C8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13CQ709C8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13CQ709C8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13CQ709C8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
VPS13CQ709C8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13CQ709C8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS13CQ709C8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13CQ709C8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
VPS13CQ709C8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
VPS13CQ709C8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
VPS13CQ709C8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS13CQ709C8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13CQ709C8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13CQ709C8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
VPS13CQ709C8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS13CQ709C8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
VPS13CQ709C8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS13CQ709C8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13CQ709C8 AC239800.4-201ENST00000603712 296 ntBASIC14.94□□□□□ -0.02
VPS13CQ709C8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS13CQ709C8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS13CQ709C8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.93□□□□□ -0.02
VPS13CQ709C8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13CQ709C8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13CQ709C8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13CQ709C8 SIRPAP1-201ENST00000448467 1770 ntBASIC14.93□□□□□ -0.02
VPS13CQ709C8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13CQ709C8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13CQ709C8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13CQ709C8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.93□□□□□ -0.02
VPS13CQ709C8 AC190387.1-201ENST00000551683 408 ntBASIC14.93□□□□□ -0.02
VPS13CQ709C8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS13CQ709C8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.93□□□□□ -0.02
VPS13CQ709C8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS13CQ709C8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS13CQ709C8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13CQ709C8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13CQ709C8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13CQ709C8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS13CQ709C8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
VPS13CQ709C8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS13CQ709C8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13CQ709C8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13CQ709C8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS13CQ709C8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13CQ709C8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
VPS13CQ709C8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS13CQ709C8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS13CQ709C8 AC244107.1-201ENST00000442033 332 ntBASIC14.92□□□□□ -0.02
VPS13CQ709C8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS13CQ709C8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13CQ709C8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS13CQ709C8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS13CQ709C8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VPS13CQ709C8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13CQ709C8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
VPS13CQ709C8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13CQ709C8 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS13CQ709C8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS13CQ709C8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13CQ709C8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS13CQ709C8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13CQ709C8 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.92□□□□□ -0.02
VPS13CQ709C8 AC005593.1-201ENST00000624894 515 ntBASIC14.92□□□□□ -0.02
VPS13CQ709C8 ESPNP-201ENST00000270691 2015 ntBASIC14.92□□□□□ -0.02
VPS13CQ709C8 AL049757.1-201ENST00000616842 1596 ntBASIC14.92□□□□□ -0.02
VPS13CQ709C8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13CQ709C8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VPS13CQ709C8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS13CQ709C8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13CQ709C8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
VPS13CQ709C8 HCG4B-203ENST00000450128 991 ntBASIC14.92□□□□□ -0.02
VPS13CQ709C8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.92□□□□□ -0.02
VPS13CQ709C8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS13CQ709C8 AL390955.2-201ENST00000603032 514 ntBASIC14.92□□□□□ -0.02
VPS13CQ709C8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13CQ709C8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13CQ709C8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13CQ709C8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS13CQ709C8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13CQ709C8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13CQ709C8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS13CQ709C8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13CQ709C8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS13CQ709C8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS13CQ709C8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13CQ709C8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13CQ709C8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13CQ709C8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.91□□□□□ -0.02
VPS13CQ709C8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.91□□□□□ -0.02
VPS13CQ709C8 C20orf181-201ENST00000623918 480 ntBASIC14.91□□□□□ -0.02
VPS13CQ709C8 AC005332.7-201ENST00000614046 2005 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms