Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 AL031598.1-201ENST00000561511 1773 ntBASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 KRT18P22-201ENST00000402024 1347 ntBASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL4BQ6ZWI9 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 AL118508.1-201ENST00000613502 2345 ntBASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 MIR3180-5-201ENST00000583743 153 ntBASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 AC012306.2-201ENST00000609350 630 ntBASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL4BQ6ZWI9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 AL357033.4-201ENST00000617703 1807 ntBASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 HMGA1P5-201ENST00000412453 271 ntBASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 KRT8P45-201ENST00000414328 1447 ntBASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 AC211429.1-201ENST00000415277 523 ntBASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 ANO7L1-203ENST00000602586 1720 ntBASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 CR769767.2-201ENST00000622735 460 ntBASIC16.15■□□□□ 0.18
RFPL4BQ6ZWI9 AC097493.4-201ENST00000641197 219 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms