Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRAT1Q6PJG6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRAT1Q6PJG6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRAT1Q6PJG6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.03■□□□□ 0.48
BRAT1Q6PJG6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.03■□□□□ 0.48
BRAT1Q6PJG6 LETM1P2-201ENST00000597330 2178 ntBASIC18.03■□□□□ 0.48
BRAT1Q6PJG6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
BRAT1Q6PJG6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
BRAT1Q6PJG6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRAT1Q6PJG6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.03■□□□□ 0.48
BRAT1Q6PJG6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 POM121L3P-201ENST00000419331 1163 ntBASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 AC012313.10-201ENST00000623509 926 ntBASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
BRAT1Q6PJG6 REXO1L9P-201ENST00000604264 2108 ntBASIC18.02■□□□□ 0.47
BRAT1Q6PJG6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
BRAT1Q6PJG6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
BRAT1Q6PJG6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
BRAT1Q6PJG6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
BRAT1Q6PJG6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
BRAT1Q6PJG6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 AL450487.1-201ENST00000426799 995 ntBASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 FOSL1P1-201ENST00000511041 816 ntBASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 AL138831.2-201ENST00000606564 490 ntBASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRAT1Q6PJG6 BICD1-207ENST00000551848 1962 ntBASIC18■□□□□ 0.47
BRAT1Q6PJG6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18■□□□□ 0.47
BRAT1Q6PJG6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18■□□□□ 0.47
BRAT1Q6PJG6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
BRAT1Q6PJG6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18■□□□□ 0.47
BRAT1Q6PJG6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BRAT1Q6PJG6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
BRAT1Q6PJG6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
BRAT1Q6PJG6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18■□□□□ 0.47
BRAT1Q6PJG6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BRAT1Q6PJG6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18■□□□□ 0.47
BRAT1Q6PJG6 AC125634.1-201ENST00000438758 1403 ntBASIC18■□□□□ 0.47
BRAT1Q6PJG6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
BRAT1Q6PJG6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
BRAT1Q6PJG6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
BRAT1Q6PJG6 TSPY19P-201ENST00000418461 509 ntBASIC18■□□□□ 0.47
BRAT1Q6PJG6 TSPY18P-201ENST00000441642 509 ntBASIC18■□□□□ 0.47
BRAT1Q6PJG6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BRAT1Q6PJG6 AC009533.2-201ENST00000543664 586 ntBASIC18■□□□□ 0.47
BRAT1Q6PJG6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18■□□□□ 0.47
BRAT1Q6PJG6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18■□□□□ 0.47
BRAT1Q6PJG6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18■□□□□ 0.47
BRAT1Q6PJG6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BRAT1Q6PJG6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
BRAT1Q6PJG6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18■□□□□ 0.47
BRAT1Q6PJG6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
BRAT1Q6PJG6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18■□□□□ 0.47
BRAT1Q6PJG6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
BRAT1Q6PJG6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
BRAT1Q6PJG6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms