Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 LINC00896-202ENST00000609602 2128 ntBASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 AC100803.2-201ENST00000562459 1963 ntBASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 LINC00602-201ENST00000629776 2065 ntBASIC17.91■□□□□ 0.46
ZNF549Q6P9A3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 STARP1-201ENST00000397973 869 ntBASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 AC092597.1-201ENST00000487352 616 ntBASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 AC006011.2-201ENST00000621313 1158 ntBASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
ZNF549Q6P9A3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
ZNF549Q6P9A3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ZNF549Q6P9A3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
ZNF549Q6P9A3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 HLA-F-220ENST00000434407 884 ntBASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 KRT18P38-201ENST00000449496 1282 ntBASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 AL136038.4-201ENST00000603606 1261 ntBASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms