Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 AP000525.1-201ENST00000608286 694 ntBASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 HYMAI-201ENST00000635591 3347 ntBASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 MIR1238-201ENST00000408483 83 ntBASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
TMEM53Q6P2H8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 FITM1-202ENST00000559294 800 ntBASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 C8orf49-201ENST00000525043 1968 ntBASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms