Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 AL390961.4-201ENST00000623958 2535 ntBASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 FLJ13224-201ENST00000313737 1514 ntBASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 BX276092.5-203ENST00000456199 560 ntBASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 RN7SL606P-201ENST00000472779 293 ntBASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP4R3AQ6IN85 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 AC090616.6-201ENST00000582640 721 ntBASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 AC138028.4-201ENST00000564984 1845 ntBASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R3AQ6IN85 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 AC068472.1-201ENST00000474589 881 ntBASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PPP4R3AQ6IN85 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
PPP4R3AQ6IN85 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
PPP4R3AQ6IN85 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms