Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.73■□□□□ 0.59
LRRC38Q5VT99 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
LRRC38Q5VT99 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
LRRC38Q5VT99 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
LRRC38Q5VT99 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRC38Q5VT99 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC38Q5VT99 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRC38Q5VT99 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRC38Q5VT99 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC38Q5VT99 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC38Q5VT99 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.72■□□□□ 0.59
LRRC38Q5VT99 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC38Q5VT99 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC38Q5VT99 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC38Q5VT99 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC38Q5VT99 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRC38Q5VT99 AC113347.1-201ENST00000413321 391 ntBASIC18.72■□□□□ 0.59
LRRC38Q5VT99 BX664615.1-201ENST00000443558 458 ntBASIC18.72■□□□□ 0.59
LRRC38Q5VT99 ATP5G1P1-201ENST00000448724 379 ntBASIC18.72■□□□□ 0.59
LRRC38Q5VT99 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LRRC38Q5VT99 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC38Q5VT99 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC38Q5VT99 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC38Q5VT99 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRC38Q5VT99 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.72■□□□□ 0.59
LRRC38Q5VT99 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC38Q5VT99 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
LRRC38Q5VT99 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC38Q5VT99 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC38Q5VT99 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC38Q5VT99 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRC38Q5VT99 BCL2-203ENST00000589955 5011 ntBASIC18.72■□□□□ 0.59
LRRC38Q5VT99 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 AL355312.1-201ENST00000407115 2176 ntBASIC18.71■□□□□ 0.59
LRRC38Q5VT99 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.71■□□□□ 0.59
LRRC38Q5VT99 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.71■□□□□ 0.59
LRRC38Q5VT99 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
LRRC38Q5VT99 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 AC005363.2-201ENST00000618631 242 ntBASIC18.7■□□□□ 0.58
LRRC38Q5VT99 AC073508.3-201ENST00000619697 1419 ntBASIC18.7■□□□□ 0.58
LRRC38Q5VT99 AC011558.1-201ENST00000623459 338 ntBASIC18.7■□□□□ 0.58
LRRC38Q5VT99 AC073912.3-201ENST00000624414 853 ntBASIC18.7■□□□□ 0.58
LRRC38Q5VT99 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.7■□□□□ 0.58
LRRC38Q5VT99 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms