Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RC3H1Q5TC82 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RC3H1Q5TC82 ELL2P1-201ENST00000413990 1906 ntBASIC22.59■■□□□ 1.21
RC3H1Q5TC82 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC22.58■■□□□ 1.21
RC3H1Q5TC82 NCF1C-201ENST00000438382 1427 ntBASIC22.58■■□□□ 1.21
RC3H1Q5TC82 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RC3H1Q5TC82 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
RC3H1Q5TC82 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
RC3H1Q5TC82 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RC3H1Q5TC82 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
RC3H1Q5TC82 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RC3H1Q5TC82 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RC3H1Q5TC82 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RC3H1Q5TC82 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RC3H1Q5TC82 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RC3H1Q5TC82 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
RC3H1Q5TC82 NKTR-203ENST00000442970 646 ntTSL 2 BASIC22.58■■□□□ 1.21
RC3H1Q5TC82 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC22.58■■□□□ 1.21
RC3H1Q5TC82 AC018845.2-201ENST00000568326 409 ntBASIC22.58■■□□□ 1.21
RC3H1Q5TC82 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
RC3H1Q5TC82 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
RC3H1Q5TC82 AC132938.5-201ENST00000624980 1813 ntBASIC22.58■■□□□ 1.21
RC3H1Q5TC82 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RC3H1Q5TC82 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC22.58■■□□□ 1.2
RC3H1Q5TC82 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RC3H1Q5TC82 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC22.58■■□□□ 1.2
RC3H1Q5TC82 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RC3H1Q5TC82 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
RC3H1Q5TC82 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC22.57■■□□□ 1.2
RC3H1Q5TC82 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC22.57■■□□□ 1.2
RC3H1Q5TC82 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.57■■□□□ 1.2
RC3H1Q5TC82 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC22.57■■□□□ 1.2
RC3H1Q5TC82 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RC3H1Q5TC82 RPS15P9-201ENST00000494093 319 ntBASIC22.57■■□□□ 1.2
RC3H1Q5TC82 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC22.57■■□□□ 1.2
RC3H1Q5TC82 CIPC-205ENST00000555437 566 ntTSL 3 BASIC22.57■■□□□ 1.2
RC3H1Q5TC82 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RC3H1Q5TC82 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC22.57■■□□□ 1.2
RC3H1Q5TC82 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC22.57■■□□□ 1.2
RC3H1Q5TC82 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RC3H1Q5TC82 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RC3H1Q5TC82 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RC3H1Q5TC82 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.57■■□□□ 1.2
RC3H1Q5TC82 ESPNP-201ENST00000270691 2015 ntBASIC22.57■■□□□ 1.2
RC3H1Q5TC82 ANO7L1-203ENST00000602586 1720 ntBASIC22.57■■□□□ 1.2
RC3H1Q5TC82 AC093010.1-201ENST00000473625 1624 ntBASIC22.57■■□□□ 1.2
RC3H1Q5TC82 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RC3H1Q5TC82 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RC3H1Q5TC82 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RC3H1Q5TC82 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RC3H1Q5TC82 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RC3H1Q5TC82 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RC3H1Q5TC82 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC22.56■■□□□ 1.2
RC3H1Q5TC82 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC22.56■■□□□ 1.2
RC3H1Q5TC82 AP002472.1-201ENST00000577490 586 ntBASIC22.56■■□□□ 1.2
RC3H1Q5TC82 MIR4751-201ENST00000578027 74 ntBASIC22.56■■□□□ 1.2
RC3H1Q5TC82 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC22.56■■□□□ 1.2
RC3H1Q5TC82 AC004790.2-201ENST00000623588 572 ntBASIC22.56■■□□□ 1.2
RC3H1Q5TC82 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RC3H1Q5TC82 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RC3H1Q5TC82 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.56■■□□□ 1.2
RC3H1Q5TC82 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
RC3H1Q5TC82 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.56■■□□□ 1.2
RC3H1Q5TC82 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 GID4-202ENST00000376345 1391 ntTSL 3 BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 MAL2-202ENST00000531508 892 ntTSL 3 BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC22.55■■□□□ 1.2
RC3H1Q5TC82 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RC3H1Q5TC82 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
RC3H1Q5TC82 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
RC3H1Q5TC82 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RC3H1Q5TC82 GPR89P-201ENST00000407924 1495 ntBASIC22.54■■□□□ 1.2
RC3H1Q5TC82 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RC3H1Q5TC82 AC148477.5-201ENST00000625164 1645 ntBASIC22.54■■□□□ 1.2
RC3H1Q5TC82 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RC3H1Q5TC82 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
RC3H1Q5TC82 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RC3H1Q5TC82 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
RC3H1Q5TC82 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RC3H1Q5TC82 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC22.54■■□□□ 1.2
RC3H1Q5TC82 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms