Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 AC133963.1-201ENST00000504166 1679 ntBASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 FSCN1P1-201ENST00000568912 1481 ntBASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 AC096733.2-201ENST00000609937 1394 ntBASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 AC073195.1-201ENST00000607241 877 ntBASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 HOXB1-202ENST00000577092 1414 ntBASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC00242Q5T6M2 TNRC18P3-201ENST00000441896 2691 ntBASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 OR6D1P-203ENST00000641209 4860 ntBASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 CROCCP2-202ENST00000412962 2773 ntBASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 AL355802.2-201ENST00000402069 882 ntBASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 AF186192.3-201ENST00000583427 947 ntBASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00242Q5T6M2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
LINC00242Q5T6M2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC12.33□□□□□ -0.43
LINC00242Q5T6M2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC12.33□□□□□ -0.43
LINC00242Q5T6M2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC12.33□□□□□ -0.43
LINC00242Q5T6M2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 ESRRAP1-201ENST00000400596 1257 ntBASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 MESTP1-201ENST00000404287 994 ntBASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms