Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC29.27■■■□□ 2.28
SNAPC4Q5SXM2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC29.27■■■□□ 2.28
SNAPC4Q5SXM2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
SNAPC4Q5SXM2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC29.27■■■□□ 2.28
SNAPC4Q5SXM2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SNAPC4Q5SXM2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SNAPC4Q5SXM2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
SNAPC4Q5SXM2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC29.26■■■□□ 2.27
SNAPC4Q5SXM2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
SNAPC4Q5SXM2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC29.26■■■□□ 2.27
SNAPC4Q5SXM2 PMS2P4-201ENST00000412466 1052 ntBASIC29.26■■■□□ 2.27
SNAPC4Q5SXM2 AC007274.1-201ENST00000439805 662 ntBASIC29.26■■■□□ 2.27
SNAPC4Q5SXM2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC29.26■■■□□ 2.27
SNAPC4Q5SXM2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
SNAPC4Q5SXM2 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC29.26■■■□□ 2.27
SNAPC4Q5SXM2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC29.26■■■□□ 2.27
SNAPC4Q5SXM2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC29.26■■■□□ 2.27
SNAPC4Q5SXM2 AC093520.2-201ENST00000561830 333 ntBASIC29.26■■■□□ 2.27
SNAPC4Q5SXM2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
SNAPC4Q5SXM2 TK1-204ENST00000590430 683 ntTSL 3 BASIC29.26■■■□□ 2.27
SNAPC4Q5SXM2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC29.26■■■□□ 2.27
SNAPC4Q5SXM2 AC132938.5-201ENST00000624980 1813 ntBASIC29.26■■■□□ 2.27
SNAPC4Q5SXM2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC29.26■■■□□ 2.27
SNAPC4Q5SXM2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
SNAPC4Q5SXM2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC29.26■■■□□ 2.27
SNAPC4Q5SXM2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
SNAPC4Q5SXM2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SNAPC4Q5SXM2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
SNAPC4Q5SXM2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
SNAPC4Q5SXM2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC29.25■■■□□ 2.27
SNAPC4Q5SXM2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SNAPC4Q5SXM2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC29.25■■■□□ 2.27
SNAPC4Q5SXM2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
SNAPC4Q5SXM2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC29.25■■■□□ 2.27
SNAPC4Q5SXM2 AC015911.4-201ENST00000588022 1070 ntBASIC29.25■■■□□ 2.27
SNAPC4Q5SXM2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
SNAPC4Q5SXM2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SNAPC4Q5SXM2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC29.25■■■□□ 2.27
SNAPC4Q5SXM2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC29.25■■■□□ 2.27
SNAPC4Q5SXM2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SNAPC4Q5SXM2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC29.25■■■□□ 2.27
SNAPC4Q5SXM2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC29.25■■■□□ 2.27
SNAPC4Q5SXM2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC29.25■■■□□ 2.27
SNAPC4Q5SXM2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
SNAPC4Q5SXM2 MIR661-201ENST00000384842 89 ntBASIC29.24■■■□□ 2.27
SNAPC4Q5SXM2 FAM86GP-201ENST00000448322 971 ntBASIC29.24■■■□□ 2.27
SNAPC4Q5SXM2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SNAPC4Q5SXM2 AC087641.1-201ENST00000557561 1021 ntBASIC29.24■■■□□ 2.27
SNAPC4Q5SXM2 AL499627.1-201ENST00000569373 2188 ntBASIC29.24■■■□□ 2.27
SNAPC4Q5SXM2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SNAPC4Q5SXM2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SNAPC4Q5SXM2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC29.24■■■□□ 2.27
SNAPC4Q5SXM2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SNAPC4Q5SXM2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SNAPC4Q5SXM2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SNAPC4Q5SXM2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
SNAPC4Q5SXM2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 BAD-202ENST00000394531 631 ntTSL 3 BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 LINC00628-201ENST00000628516 1289 ntBASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 BID-204ENST00000399767 2129 ntTSL 2 BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 AC025580.3-201ENST00000617932 1424 ntBASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 HLA-DRB6-201ENST00000411500 1235 ntBASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 KLF4P1-201ENST00000412782 1185 ntBASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 AC068137.2-201ENST00000605408 478 ntBASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 AC009093.7-201ENST00000623853 1223 ntBASIC29.23■■■□□ 2.27
SNAPC4Q5SXM2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC29.22■■■□□ 2.27
SNAPC4Q5SXM2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
SNAPC4Q5SXM2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC29.22■■■□□ 2.27
SNAPC4Q5SXM2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC29.22■■■□□ 2.27
SNAPC4Q5SXM2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC29.22■■■□□ 2.27
SNAPC4Q5SXM2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC29.22■■■□□ 2.27
SNAPC4Q5SXM2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC29.22■■■□□ 2.27
SNAPC4Q5SXM2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC29.22■■■□□ 2.27
SNAPC4Q5SXM2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
SNAPC4Q5SXM2 AC074386.1-202ENST00000463561 864 ntBASIC29.22■■■□□ 2.27
SNAPC4Q5SXM2 AC005225.4-201ENST00000557330 545 ntBASIC29.22■■■□□ 2.27
SNAPC4Q5SXM2 DUT-210ENST00000559935 569 ntTSL 3 BASIC29.22■■■□□ 2.27
SNAPC4Q5SXM2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC29.22■■■□□ 2.27
SNAPC4Q5SXM2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC29.22■■■□□ 2.27
SNAPC4Q5SXM2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC29.22■■■□□ 2.27
SNAPC4Q5SXM2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC29.22■■■□□ 2.27
SNAPC4Q5SXM2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms