Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.03■□□□□ 0.64
VARS2Q5ST30 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.03■□□□□ 0.64
VARS2Q5ST30 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.03■□□□□ 0.64
VARS2Q5ST30 AP005117.1-201ENST00000584346 1413 ntBASIC19.03■□□□□ 0.64
VARS2Q5ST30 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.03■□□□□ 0.64
VARS2Q5ST30 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.03■□□□□ 0.64
VARS2Q5ST30 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.03■□□□□ 0.64
VARS2Q5ST30 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 AL031284.1-201ENST00000419297 478 ntBASIC19.03■□□□□ 0.64
VARS2Q5ST30 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.03■□□□□ 0.64
VARS2Q5ST30 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.03■□□□□ 0.64
VARS2Q5ST30 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.03■□□□□ 0.64
VARS2Q5ST30 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.03■□□□□ 0.64
VARS2Q5ST30 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.03■□□□□ 0.64
VARS2Q5ST30 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
VARS2Q5ST30 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.03■□□□□ 0.64
VARS2Q5ST30 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VARS2Q5ST30 AC097374.2-201ENST00000618617 1306 ntBASIC19.02■□□□□ 0.64
VARS2Q5ST30 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VARS2Q5ST30 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
VARS2Q5ST30 AC098818.2-201ENST00000564925 2320 ntBASIC19.02■□□□□ 0.64
VARS2Q5ST30 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VARS2Q5ST30 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.02■□□□□ 0.64
VARS2Q5ST30 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.02■□□□□ 0.64
VARS2Q5ST30 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.02■□□□□ 0.64
VARS2Q5ST30 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.02■□□□□ 0.64
VARS2Q5ST30 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VARS2Q5ST30 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.02■□□□□ 0.64
VARS2Q5ST30 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VARS2Q5ST30 AC007967.3-201ENST00000434308 558 ntBASIC19.02■□□□□ 0.64
VARS2Q5ST30 AC018712.1-201ENST00000455767 687 ntBASIC19.02■□□□□ 0.64
VARS2Q5ST30 RNPS1P1-201ENST00000507437 918 ntBASIC19.02■□□□□ 0.64
VARS2Q5ST30 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
VARS2Q5ST30 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.02■□□□□ 0.64
VARS2Q5ST30 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.02■□□□□ 0.64
VARS2Q5ST30 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC19.02■□□□□ 0.64
VARS2Q5ST30 AC120114.3-201ENST00000611923 658 ntBASIC19.02■□□□□ 0.64
VARS2Q5ST30 BX640515.1-201ENST00000617215 977 ntBASIC19.02■□□□□ 0.64
VARS2Q5ST30 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
VARS2Q5ST30 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VARS2Q5ST30 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VARS2Q5ST30 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VARS2Q5ST30 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.02■□□□□ 0.63
VARS2Q5ST30 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VARS2Q5ST30 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VARS2Q5ST30 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VARS2Q5ST30 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VARS2Q5ST30 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VARS2Q5ST30 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VARS2Q5ST30 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VARS2Q5ST30 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VARS2Q5ST30 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VARS2Q5ST30 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
VARS2Q5ST30 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VARS2Q5ST30 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 AL590627.1-203ENST00000421194 1026 ntBASIC19.01■□□□□ 0.63
VARS2Q5ST30 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VARS2Q5ST30 SCARNA2-201ENST00000458748 420 ntBASIC19.01■□□□□ 0.63
VARS2Q5ST30 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 AC073648.2-201ENST00000510116 352 ntBASIC19.01■□□□□ 0.63
VARS2Q5ST30 AL671883.3-201ENST00000603274 991 ntBASIC19.01■□□□□ 0.63
VARS2Q5ST30 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 KRT8P47-201ENST00000604727 1398 ntBASIC19.01■□□□□ 0.63
VARS2Q5ST30 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms