Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 FAM215A-202ENST00000632077 792 ntBASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 AC007967.3-201ENST00000434308 558 ntBASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 SCARNA2-201ENST00000458748 420 ntBASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 AC073648.2-201ENST00000510116 352 ntBASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 AC021087.4-201ENST00000563761 564 ntBASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 AC023511.2-201ENST00000618803 211 ntBASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 AC093010.1-201ENST00000473625 1624 ntBASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
RNFT1Q5M7Z0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 MIR574-201ENST00000385209 96 ntBASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RNFT1Q5M7Z0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms