Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC178Q5BJE1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC178Q5BJE1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC178Q5BJE1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC178Q5BJE1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CCDC178Q5BJE1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC178Q5BJE1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC178Q5BJE1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC178Q5BJE1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC178Q5BJE1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC178Q5BJE1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC178Q5BJE1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CCDC178Q5BJE1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC178Q5BJE1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC178Q5BJE1 AC097374.2-201ENST00000618617 1306 ntBASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 POM121L3P-201ENST00000419331 1163 ntBASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 NSUN5P1-202ENST00000421140 1535 ntBASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 NSUN5P2-203ENST00000457352 1529 ntBASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC178Q5BJE1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 MINOS1P3-201ENST00000457048 203 ntBASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 AC009533.2-201ENST00000543664 586 ntBASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 AP005901.3-202ENST00000581653 237 ntBASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 AC116407.2-201ENST00000613639 860 ntBASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 AC104581.1-202ENST00000635932 2618 ntBASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC178Q5BJE1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 REXO1L9P-201ENST00000604264 2108 ntBASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms