Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL20P78556 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL20P78556 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CCL20P78556 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL20P78556 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.22□□□□□ -0.13
CCL20P78556 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL20P78556 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL20P78556 AC092850.2-201ENST00000623821 2697 ntBASIC14.22□□□□□ -0.13
CCL20P78556 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL20P78556 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CCL20P78556 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL20P78556 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL20P78556 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.22□□□□□ -0.13
CCL20P78556 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL20P78556 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCL20P78556 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CCL20P78556 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL20P78556 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CCL20P78556 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL20P78556 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL20P78556 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
CCL20P78556 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL20P78556 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CCL20P78556 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL20P78556 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
CCL20P78556 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL20P78556 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CCL20P78556 AC060834.1-201ENST00000443027 2032 ntBASIC14.21□□□□□ -0.13
CCL20P78556 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL20P78556 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
CCL20P78556 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.21□□□□□ -0.13
CCL20P78556 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
CCL20P78556 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL20P78556 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL20P78556 AL512625.2-201ENST00000417533 625 ntBASIC14.21□□□□□ -0.13
CCL20P78556 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.21□□□□□ -0.13
CCL20P78556 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.21□□□□□ -0.13
CCL20P78556 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.21□□□□□ -0.13
CCL20P78556 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.21□□□□□ -0.13
CCL20P78556 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL20P78556 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL20P78556 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
CCL20P78556 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL20P78556 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCL20P78556 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CCL20P78556 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL20P78556 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL20P78556 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCL20P78556 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL20P78556 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.21□□□□□ -0.14
CCL20P78556 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCL20P78556 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCL20P78556 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL20P78556 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CCL20P78556 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL20P78556 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.2□□□□□ -0.14
CCL20P78556 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL20P78556 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL20P78556 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL20P78556 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL20P78556 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CCL20P78556 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL20P78556 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL20P78556 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL20P78556 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL20P78556 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.2□□□□□ -0.14
CCL20P78556 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
CCL20P78556 AC093010.1-201ENST00000473625 1624 ntBASIC14.2□□□□□ -0.14
CCL20P78556 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL20P78556 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL20P78556 AL356309.3-201ENST00000624132 1934 ntBASIC14.2□□□□□ -0.14
CCL20P78556 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL20P78556 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL20P78556 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.2□□□□□ -0.14
CCL20P78556 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.2□□□□□ -0.14
CCL20P78556 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.2□□□□□ -0.14
CCL20P78556 AC131212.1-201ENST00000613771 668 ntBASIC14.2□□□□□ -0.14
CCL20P78556 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL20P78556 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL20P78556 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.2□□□□□ -0.14
CCL20P78556 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL20P78556 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL20P78556 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.2□□□□□ -0.14
CCL20P78556 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CCL20P78556 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
CCL20P78556 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CCL20P78556 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL20P78556 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL20P78556 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL20P78556 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.2□□□□□ -0.14
CCL20P78556 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.2□□□□□ -0.14
CCL20P78556 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL20P78556 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL20P78556 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL20P78556 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCL20P78556 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL20P78556 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCL20P78556 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL20P78556 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL20P78556 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms