Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.96■□□□□ 0.95
IRX3P78415 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.96■□□□□ 0.95
IRX3P78415 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
IRX3P78415 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IRX3P78415 LINC00602-201ENST00000629776 2065 ntBASIC20.96■□□□□ 0.95
IRX3P78415 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IRX3P78415 PMS2P7-201ENST00000506558 1336 ntBASIC20.96■□□□□ 0.95
IRX3P78415 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
IRX3P78415 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IRX3P78415 ZNF259P1-201ENST00000407656 1365 ntBASIC20.96■□□□□ 0.95
IRX3P78415 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IRX3P78415 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.96■□□□□ 0.95
IRX3P78415 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.95■□□□□ 0.94
IRX3P78415 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
IRX3P78415 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IRX3P78415 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IRX3P78415 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IRX3P78415 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.95■□□□□ 0.94
IRX3P78415 HNRNPDP1-201ENST00000439535 754 ntBASIC20.95■□□□□ 0.94
IRX3P78415 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.95■□□□□ 0.94
IRX3P78415 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IRX3P78415 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.95■□□□□ 0.94
IRX3P78415 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.95■□□□□ 0.94
IRX3P78415 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.95■□□□□ 0.94
IRX3P78415 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
IRX3P78415 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.95■□□□□ 0.94
IRX3P78415 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
IRX3P78415 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IRX3P78415 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
IRX3P78415 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.95■□□□□ 0.94
IRX3P78415 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
IRX3P78415 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.95■□□□□ 0.94
IRX3P78415 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.94■□□□□ 0.94
IRX3P78415 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IRX3P78415 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IRX3P78415 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
IRX3P78415 AL356309.3-201ENST00000624132 1934 ntBASIC20.94■□□□□ 0.94
IRX3P78415 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IRX3P78415 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
IRX3P78415 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IRX3P78415 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IRX3P78415 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IRX3P78415 MIR1233-2-201ENST00000408138 82 ntBASIC20.94■□□□□ 0.94
IRX3P78415 MIR1233-1-201ENST00000408722 82 ntBASIC20.94■□□□□ 0.94
IRX3P78415 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.94■□□□□ 0.94
IRX3P78415 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.94■□□□□ 0.94
IRX3P78415 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.94■□□□□ 0.94
IRX3P78415 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.94■□□□□ 0.94
IRX3P78415 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.94■□□□□ 0.94
IRX3P78415 AC011467.2-201ENST00000598425 242 ntBASIC20.94■□□□□ 0.94
IRX3P78415 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.94■□□□□ 0.94
IRX3P78415 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IRX3P78415 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.94■□□□□ 0.94
IRX3P78415 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IRX3P78415 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IRX3P78415 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IRX3P78415 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.94■□□□□ 0.94
IRX3P78415 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IRX3P78415 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.94■□□□□ 0.94
IRX3P78415 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IRX3P78415 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IRX3P78415 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.93■□□□□ 0.94
IRX3P78415 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
IRX3P78415 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IRX3P78415 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.93■□□□□ 0.94
IRX3P78415 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
IRX3P78415 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
IRX3P78415 AL139384.1-201ENST00000612143 3047 ntBASIC20.93■□□□□ 0.94
IRX3P78415 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.93■□□□□ 0.94
IRX3P78415 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IRX3P78415 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
IRX3P78415 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.93■□□□□ 0.94
IRX3P78415 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.93■□□□□ 0.94
IRX3P78415 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.93■□□□□ 0.94
IRX3P78415 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.93■□□□□ 0.94
IRX3P78415 AC116407.3-201ENST00000623905 1129 ntBASIC20.93■□□□□ 0.94
IRX3P78415 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.93■□□□□ 0.94
IRX3P78415 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IRX3P78415 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IRX3P78415 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IRX3P78415 AC125634.1-201ENST00000438758 1403 ntBASIC20.93■□□□□ 0.94
IRX3P78415 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.93■□□□□ 0.94
IRX3P78415 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IRX3P78415 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.93■□□□□ 0.94
IRX3P78415 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.93■□□□□ 0.94
IRX3P78415 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IRX3P78415 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IRX3P78415 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
IRX3P78415 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IRX3P78415 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
IRX3P78415 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
IRX3P78415 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.92■□□□□ 0.94
IRX3P78415 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
IRX3P78415 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
IRX3P78415 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
IRX3P78415 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
IRX3P78415 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.92■□□□□ 0.94
IRX3P78415 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.92■□□□□ 0.94
IRX3P78415 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IRX3P78415 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms