Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.44■□□□□ 0.86
CCNA1P78396 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.44■□□□□ 0.86
CCNA1P78396 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.44■□□□□ 0.86
CCNA1P78396 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.44■□□□□ 0.86
CCNA1P78396 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
CCNA1P78396 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.44■□□□□ 0.86
CCNA1P78396 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.44■□□□□ 0.86
CCNA1P78396 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CCNA1P78396 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CCNA1P78396 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.44■□□□□ 0.86
CCNA1P78396 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCNA1P78396 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.44■□□□□ 0.86
CCNA1P78396 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCNA1P78396 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCNA1P78396 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.44■□□□□ 0.86
CCNA1P78396 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCNA1P78396 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCNA1P78396 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
CCNA1P78396 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCNA1P78396 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CCNA1P78396 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCNA1P78396 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCNA1P78396 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCNA1P78396 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.43■□□□□ 0.86
CCNA1P78396 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.43■□□□□ 0.86
CCNA1P78396 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.43■□□□□ 0.86
CCNA1P78396 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCNA1P78396 AC132938.6-201ENST00000623828 1655 ntBASIC20.43■□□□□ 0.86
CCNA1P78396 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCNA1P78396 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.43■□□□□ 0.86
CCNA1P78396 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCNA1P78396 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCNA1P78396 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.43■□□□□ 0.86
CCNA1P78396 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCNA1P78396 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.43■□□□□ 0.86
CCNA1P78396 AC007967.2-201ENST00000432613 625 ntBASIC20.43■□□□□ 0.86
CCNA1P78396 AC103564.2-201ENST00000432853 1299 ntBASIC20.43■□□□□ 0.86
CCNA1P78396 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.43■□□□□ 0.86
CCNA1P78396 AC112482.1-201ENST00000492080 688 ntBASIC20.43■□□□□ 0.86
CCNA1P78396 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCNA1P78396 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.43■□□□□ 0.86
CCNA1P78396 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.43■□□□□ 0.86
CCNA1P78396 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCNA1P78396 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.43■□□□□ 0.86
CCNA1P78396 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCNA1P78396 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCNA1P78396 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCNA1P78396 AC005082.1-201ENST00000413042 2259 ntBASIC20.43■□□□□ 0.86
CCNA1P78396 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCNA1P78396 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCNA1P78396 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.43■□□□□ 0.86
CCNA1P78396 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.43■□□□□ 0.86
CCNA1P78396 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCNA1P78396 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCNA1P78396 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCNA1P78396 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCNA1P78396 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.42■□□□□ 0.86
CCNA1P78396 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCNA1P78396 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.42■□□□□ 0.86
CCNA1P78396 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.42■□□□□ 0.86
CCNA1P78396 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.42■□□□□ 0.86
CCNA1P78396 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.42■□□□□ 0.86
CCNA1P78396 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.42■□□□□ 0.86
CCNA1P78396 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
CCNA1P78396 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCNA1P78396 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.42■□□□□ 0.86
CCNA1P78396 AP001160.2-201ENST00000596071 487 ntBASIC20.42■□□□□ 0.86
CCNA1P78396 AD001527.2-201ENST00000622994 785 ntBASIC20.42■□□□□ 0.86
CCNA1P78396 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCNA1P78396 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCNA1P78396 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCNA1P78396 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCNA1P78396 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCNA1P78396 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCNA1P78396 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCNA1P78396 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.42■□□□□ 0.86
CCNA1P78396 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CCNA1P78396 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCNA1P78396 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCNA1P78396 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCNA1P78396 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCNA1P78396 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCNA1P78396 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCNA1P78396 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCNA1P78396 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.41■□□□□ 0.86
CCNA1P78396 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CCNA1P78396 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCNA1P78396 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CCNA1P78396 KRT18P27-201ENST00000427733 1299 ntBASIC20.41■□□□□ 0.86
CCNA1P78396 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.41■□□□□ 0.86
CCNA1P78396 AC004967.1-201ENST00000453589 447 ntBASIC20.41■□□□□ 0.86
CCNA1P78396 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CCNA1P78396 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.41■□□□□ 0.86
CCNA1P78396 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.41■□□□□ 0.86
CCNA1P78396 AL139424.1-201ENST00000607572 797 ntBASIC20.41■□□□□ 0.86
CCNA1P78396 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CCNA1P78396 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCNA1P78396 SIGLEC16-201ENST00000599858 1437 ntBASIC20.41■□□□□ 0.86
CCNA1P78396 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCNA1P78396 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms