Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP1P78357 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP1P78357 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP1P78357 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP1P78357 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP1P78357 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP1P78357 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP1P78357 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP1P78357 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 AC005498.2-205ENST00000593218 784 ntBASIC21.36■■□□□ 1.01
CNTNAP1P78357 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP1P78357 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
CNTNAP1P78357 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP1P78357 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.35■■□□□ 1.01
CNTNAP1P78357 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.35■■□□□ 1.01
CNTNAP1P78357 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP1P78357 AC132938.6-201ENST00000623828 1655 ntBASIC21.35■■□□□ 1.01
CNTNAP1P78357 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP1P78357 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP1P78357 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.35■■□□□ 1.01
CNTNAP1P78357 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP1P78357 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP1P78357 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP1P78357 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP1P78357 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.35■■□□□ 1.01
CNTNAP1P78357 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP1P78357 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP1P78357 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.35■■□□□ 1.01
CNTNAP1P78357 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CNTNAP1P78357 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.35■■□□□ 1.01
CNTNAP1P78357 KRT18P27-201ENST00000427733 1299 ntBASIC21.35■■□□□ 1.01
CNTNAP1P78357 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP1P78357 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.35■■□□□ 1.01
CNTNAP1P78357 HLA-V-201ENST00000429037 534 ntBASIC21.35■■□□□ 1.01
CNTNAP1P78357 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP1P78357 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC21.35■■□□□ 1.01
CNTNAP1P78357 Z92544.3-201ENST00000624747 417 ntBASIC21.35■■□□□ 1.01
CNTNAP1P78357 AC005593.1-201ENST00000624894 515 ntBASIC21.35■■□□□ 1.01
CNTNAP1P78357 PGM5P2-202ENST00000637225 1043 ntBASIC21.35■■□□□ 1.01
CNTNAP1P78357 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP1P78357 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP1P78357 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP1P78357 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.34■■□□□ 1.01
CNTNAP1P78357 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP1P78357 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP1P78357 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.34■■□□□ 1.01
CNTNAP1P78357 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.34■■□□□ 1.01
CNTNAP1P78357 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.34■■□□□ 1.01
CNTNAP1P78357 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP1P78357 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.34■■□□□ 1.01
CNTNAP1P78357 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.34■■□□□ 1.01
CNTNAP1P78357 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CNTNAP1P78357 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNTNAP1P78357 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNTNAP1P78357 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNTNAP1P78357 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.33■■□□□ 1.01
CNTNAP1P78357 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNTNAP1P78357 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.33■■□□□ 1.01
CNTNAP1P78357 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CNTNAP1P78357 ANO7L1-203ENST00000602586 1720 ntBASIC21.33■■□□□ 1
CNTNAP1P78357 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CNTNAP1P78357 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CNTNAP1P78357 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.33■■□□□ 1
CNTNAP1P78357 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.33■■□□□ 1
CNTNAP1P78357 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.33■■□□□ 1
CNTNAP1P78357 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.33■■□□□ 1
CNTNAP1P78357 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.33■■□□□ 1
CNTNAP1P78357 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.33■■□□□ 1
CNTNAP1P78357 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC21.33■■□□□ 1
CNTNAP1P78357 AP000867.4-201ENST00000641616 219 ntBASIC21.33■■□□□ 1
CNTNAP1P78357 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CNTNAP1P78357 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CNTNAP1P78357 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP1P78357 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CNTNAP1P78357 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.32■■□□□ 1
CNTNAP1P78357 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP1P78357 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP1P78357 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms