Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.93■□□□□ 0.3
RPS3AP61247 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPS3AP61247 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
RPS3AP61247 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPS3AP61247 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPS3AP61247 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPS3AP61247 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.93■□□□□ 0.3
RPS3AP61247 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.93■□□□□ 0.3
RPS3AP61247 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.93■□□□□ 0.3
RPS3AP61247 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPS3AP61247 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.93■□□□□ 0.3
RPS3AP61247 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.93■□□□□ 0.3
RPS3AP61247 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.93■□□□□ 0.3
RPS3AP61247 AP000523.1-201ENST00000398242 1049 ntBASIC16.93■□□□□ 0.3
RPS3AP61247 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.93■□□□□ 0.3
RPS3AP61247 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.93■□□□□ 0.3
RPS3AP61247 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPS3AP61247 AC010203.1-204ENST00000548782 407 ntBASIC16.93■□□□□ 0.3
RPS3AP61247 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPS3AP61247 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPS3AP61247 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RPS3AP61247 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPS3AP61247 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPS3AP61247 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPS3AP61247 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPS3AP61247 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.93■□□□□ 0.3
RPS3AP61247 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.93■□□□□ 0.3
RPS3AP61247 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS3AP61247 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
RPS3AP61247 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS3AP61247 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RPS3AP61247 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPS3AP61247 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPS3AP61247 AC134043.2-201ENST00000624206 2238 ntBASIC16.92■□□□□ 0.3
RPS3AP61247 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.92■□□□□ 0.3
RPS3AP61247 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RPS3AP61247 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS3AP61247 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS3AP61247 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RPS3AP61247 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS3AP61247 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.92■□□□□ 0.3
RPS3AP61247 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.92■□□□□ 0.3
RPS3AP61247 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.92■□□□□ 0.3
RPS3AP61247 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS3AP61247 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPS3AP61247 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.92■□□□□ 0.3
RPS3AP61247 AC083906.6-201ENST00000641366 219 ntBASIC16.92■□□□□ 0.3
RPS3AP61247 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS3AP61247 AD000864.1-201ENST00000624076 2295 ntBASIC16.92■□□□□ 0.3
RPS3AP61247 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.92■□□□□ 0.3
RPS3AP61247 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS3AP61247 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.92■□□□□ 0.3
RPS3AP61247 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPS3AP61247 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.92■□□□□ 0.3
RPS3AP61247 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
RPS3AP61247 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS3AP61247 AL118508.1-201ENST00000613502 2345 ntBASIC16.92■□□□□ 0.3
RPS3AP61247 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RPS3AP61247 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.92■□□□□ 0.3
RPS3AP61247 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS3AP61247 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.92■□□□□ 0.3
RPS3AP61247 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.92■□□□□ 0.3
RPS3AP61247 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS3AP61247 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS3AP61247 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
RPS3AP61247 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS3AP61247 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS3AP61247 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS3AP61247 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RPS3AP61247 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPS3AP61247 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS3AP61247 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS3AP61247 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS3AP61247 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPS3AP61247 AC073508.3-201ENST00000619697 1419 ntBASIC16.91■□□□□ 0.3
RPS3AP61247 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS3AP61247 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.91■□□□□ 0.3
RPS3AP61247 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS3AP61247 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS3AP61247 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS3AP61247 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.91■□□□□ 0.3
RPS3AP61247 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.91■□□□□ 0.3
RPS3AP61247 MCCD1P1-208ENST00000445732 328 ntBASIC16.91■□□□□ 0.3
RPS3AP61247 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.91■□□□□ 0.3
RPS3AP61247 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.91■□□□□ 0.3
RPS3AP61247 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.91■□□□□ 0.3
RPS3AP61247 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.91■□□□□ 0.3
RPS3AP61247 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
RPS3AP61247 AL031432.5-201ENST00000641059 760 ntBASIC16.91■□□□□ 0.3
RPS3AP61247 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
RPS3AP61247 AL645608.8-201ENST00000606034 2086 ntBASIC16.91■□□□□ 0.3
RPS3AP61247 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPS3AP61247 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS3AP61247 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS3AP61247 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS3AP61247 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.91■□□□□ 0.3
RPS3AP61247 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RPS3AP61247 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.91■□□□□ 0.3
RPS3AP61247 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPS3AP61247 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms