Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FAM3BP58499 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM3BP58499 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM3BP58499 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM3BP58499 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.08□□□□□ -0.16
FAM3BP58499 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FAM3BP58499 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM3BP58499 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
FAM3BP58499 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.08□□□□□ -0.16
FAM3BP58499 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.08□□□□□ -0.16
FAM3BP58499 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.08□□□□□ -0.16
FAM3BP58499 AC023632.3-201ENST00000521633 145 ntBASIC14.08□□□□□ -0.16
FAM3BP58499 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FAM3BP58499 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM3BP58499 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM3BP58499 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FAM3BP58499 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM3BP58499 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM3BP58499 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM3BP58499 TFP1-202ENST00000475455 1573 ntBASIC14.08□□□□□ -0.16
FAM3BP58499 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
FAM3BP58499 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM3BP58499 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.08□□□□□ -0.16
FAM3BP58499 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM3BP58499 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.08□□□□□ -0.16
FAM3BP58499 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM3BP58499 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM3BP58499 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FAM3BP58499 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
FAM3BP58499 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
FAM3BP58499 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
FAM3BP58499 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.07□□□□□ -0.16
FAM3BP58499 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
FAM3BP58499 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
FAM3BP58499 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.07□□□□□ -0.16
FAM3BP58499 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
FAM3BP58499 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 AL355472.2-201ENST00000422958 438 ntBASIC14.07□□□□□ -0.16
FAM3BP58499 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
FAM3BP58499 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 HYMAI-201ENST00000635591 3347 ntBASIC14.07□□□□□ -0.16
FAM3BP58499 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
FAM3BP58499 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
FAM3BP58499 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM3BP58499 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
FAM3BP58499 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM3BP58499 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM3BP58499 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM3BP58499 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM3BP58499 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.06□□□□□ -0.16
FAM3BP58499 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.06□□□□□ -0.16
FAM3BP58499 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM3BP58499 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM3BP58499 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.06□□□□□ -0.16
FAM3BP58499 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
FAM3BP58499 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM3BP58499 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM3BP58499 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.06□□□□□ -0.16
FAM3BP58499 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FAM3BP58499 PRORSD1P-201ENST00000295112 541 ntBASIC14.06□□□□□ -0.16
FAM3BP58499 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FAM3BP58499 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.06□□□□□ -0.16
FAM3BP58499 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM3BP58499 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
FAM3BP58499 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.06□□□□□ -0.16
FAM3BP58499 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.06□□□□□ -0.16
FAM3BP58499 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FAM3BP58499 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.06□□□□□ -0.16
FAM3BP58499 AC006058.3-201ENST00000606217 1069 ntBASIC14.06□□□□□ -0.16
FAM3BP58499 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.06□□□□□ -0.16
FAM3BP58499 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
FAM3BP58499 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.06□□□□□ -0.16
FAM3BP58499 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.06□□□□□ -0.16
FAM3BP58499 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM3BP58499 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM3BP58499 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM3BP58499 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
FAM3BP58499 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.06□□□□□ -0.16
FAM3BP58499 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms