Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXG1P55316 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXG1P55316 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXG1P55316 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXG1P55316 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXG1P55316 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXG1P55316 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
FOXG1P55316 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXG1P55316 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXG1P55316 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
FOXG1P55316 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
FOXG1P55316 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXG1P55316 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXG1P55316 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXG1P55316 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXG1P55316 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
FOXG1P55316 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXG1P55316 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
FOXG1P55316 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXG1P55316 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXG1P55316 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXG1P55316 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.79■□□□□ 0.12
FOXG1P55316 KRT17P6-201ENST00000453795 1220 ntBASIC15.79■□□□□ 0.12
FOXG1P55316 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXG1P55316 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.79■□□□□ 0.12
FOXG1P55316 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.79■□□□□ 0.12
FOXG1P55316 AC011840.4-201ENST00000578471 627 ntBASIC15.79■□□□□ 0.12
FOXG1P55316 MIR3652-201ENST00000579335 131 ntBASIC15.79■□□□□ 0.12
FOXG1P55316 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXG1P55316 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
FOXG1P55316 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXG1P55316 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXG1P55316 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
FOXG1P55316 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXG1P55316 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXG1P55316 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXG1P55316 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXG1P55316 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXG1P55316 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.79■□□□□ 0.12
FOXG1P55316 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXG1P55316 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.79■□□□□ 0.12
FOXG1P55316 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
FOXG1P55316 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXG1P55316 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
FOXG1P55316 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.78■□□□□ 0.12
FOXG1P55316 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 KRT8P47-201ENST00000604727 1398 ntBASIC15.78■□□□□ 0.12
FOXG1P55316 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.78■□□□□ 0.12
FOXG1P55316 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
FOXG1P55316 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.78■□□□□ 0.12
FOXG1P55316 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.78■□□□□ 0.12
FOXG1P55316 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.78■□□□□ 0.12
FOXG1P55316 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.78■□□□□ 0.12
FOXG1P55316 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.78■□□□□ 0.12
FOXG1P55316 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.78■□□□□ 0.12
FOXG1P55316 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.78■□□□□ 0.12
FOXG1P55316 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
FOXG1P55316 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
FOXG1P55316 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.78■□□□□ 0.12
FOXG1P55316 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
FOXG1P55316 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.78■□□□□ 0.12
FOXG1P55316 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.78■□□□□ 0.12
FOXG1P55316 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 NSUN5P1-202ENST00000421140 1535 ntBASIC15.78■□□□□ 0.12
FOXG1P55316 NSUN5P2-203ENST00000457352 1529 ntBASIC15.78■□□□□ 0.12
FOXG1P55316 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXG1P55316 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.78■□□□□ 0.12
FOXG1P55316 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
FOXG1P55316 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXG1P55316 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms