Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF144AP50876 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RNF144AP50876 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF144AP50876 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 YBX1P2-201ENST00000489612 999 ntBASIC16.79■□□□□ 0.28
RNF144AP50876 KRT18P21-201ENST00000515767 1272 ntBASIC16.79■□□□□ 0.28
RNF144AP50876 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
RNF144AP50876 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
RNF144AP50876 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF144AP50876 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF144AP50876 NEK4P2-201ENST00000580004 1012 ntBASIC16.79■□□□□ 0.28
RNF144AP50876 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 AC092865.7-201ENST00000641832 219 ntBASIC16.79■□□□□ 0.28
RNF144AP50876 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF144AP50876 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF144AP50876 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF144AP50876 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RNF144AP50876 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
RNF144AP50876 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 AC008764.6-201ENST00000595909 2069 ntBASIC16.79■□□□□ 0.28
RNF144AP50876 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF144AP50876 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF144AP50876 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF144AP50876 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF144AP50876 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF144AP50876 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF144AP50876 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RNF144AP50876 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF144AP50876 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF144AP50876 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF144AP50876 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF144AP50876 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF144AP50876 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF144AP50876 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RNF144AP50876 AL359075.1-203ENST00000462729 1002 ntBASIC16.78■□□□□ 0.28
RNF144AP50876 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF144AP50876 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF144AP50876 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.78■□□□□ 0.28
RNF144AP50876 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
RNF144AP50876 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF144AP50876 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF144AP50876 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RNF144AP50876 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF144AP50876 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF144AP50876 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RNF144AP50876 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF144AP50876 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RNF144AP50876 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF144AP50876 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF144AP50876 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF144AP50876 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF144AP50876 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF144AP50876 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF144AP50876 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF144AP50876 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF144AP50876 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF144AP50876 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF144AP50876 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF144AP50876 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF144AP50876 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RNF144AP50876 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF144AP50876 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF144AP50876 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF144AP50876 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF144AP50876 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF144AP50876 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF144AP50876 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF144AP50876 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF144AP50876 RCN1P1-201ENST00000400413 996 ntBASIC16.77■□□□□ 0.28
RNF144AP50876 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF144AP50876 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF144AP50876 KRT18P38-201ENST00000449496 1282 ntBASIC16.77■□□□□ 0.28
RNF144AP50876 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RNF144AP50876 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF144AP50876 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF144AP50876 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RNF144AP50876 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF144AP50876 AC079602.3-201ENST00000623931 403 ntBASIC16.77■□□□□ 0.28
RNF144AP50876 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF144AP50876 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF144AP50876 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF144AP50876 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF144AP50876 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RNF144AP50876 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF144AP50876 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
RNF144AP50876 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms