Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.74□□□□□ -0.05
CDX1P47902 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.74□□□□□ -0.05
CDX1P47902 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CDX1P47902 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDX1P47902 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDX1P47902 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDX1P47902 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDX1P47902 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CDX1P47902 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.74□□□□□ -0.05
CDX1P47902 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.74□□□□□ -0.05
CDX1P47902 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.74□□□□□ -0.05
CDX1P47902 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDX1P47902 BX664615.1-201ENST00000443558 458 ntBASIC14.74□□□□□ -0.05
CDX1P47902 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.74□□□□□ -0.05
CDX1P47902 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CDX1P47902 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDX1P47902 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.74□□□□□ -0.05
CDX1P47902 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDX1P47902 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CDX1P47902 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDX1P47902 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.74□□□□□ -0.05
CDX1P47902 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.74□□□□□ -0.05
CDX1P47902 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDX1P47902 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CDX1P47902 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.74□□□□□ -0.05
CDX1P47902 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDX1P47902 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDX1P47902 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDX1P47902 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDX1P47902 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDX1P47902 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDX1P47902 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDX1P47902 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
CDX1P47902 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDX1P47902 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.73□□□□□ -0.05
CDX1P47902 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDX1P47902 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDX1P47902 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDX1P47902 AC134043.2-201ENST00000624206 2238 ntBASIC14.73□□□□□ -0.05
CDX1P47902 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDX1P47902 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDX1P47902 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDX1P47902 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CDX1P47902 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDX1P47902 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDX1P47902 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDX1P47902 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDX1P47902 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.73□□□□□ -0.05
CDX1P47902 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.73□□□□□ -0.05
CDX1P47902 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
CDX1P47902 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.73□□□□□ -0.05
CDX1P47902 KRT18P57-201ENST00000443599 1254 ntBASIC14.73□□□□□ -0.05
CDX1P47902 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
CDX1P47902 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDX1P47902 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.73□□□□□ -0.05
CDX1P47902 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.73□□□□□ -0.05
CDX1P47902 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CDX1P47902 AC010331.1-201ENST00000611423 582 ntBASIC14.73□□□□□ -0.05
CDX1P47902 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
CDX1P47902 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDX1P47902 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDX1P47902 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.73□□□□□ -0.05
CDX1P47902 AC011676.5-201ENST00000624864 2660 ntBASIC14.73□□□□□ -0.05
CDX1P47902 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CDX1P47902 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDX1P47902 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDX1P47902 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDX1P47902 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDX1P47902 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.73□□□□□ -0.05
CDX1P47902 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.73□□□□□ -0.05
CDX1P47902 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDX1P47902 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.73□□□□□ -0.05
CDX1P47902 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.73□□□□□ -0.05
CDX1P47902 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CDX1P47902 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDX1P47902 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDX1P47902 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CDX1P47902 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDX1P47902 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDX1P47902 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDX1P47902 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CDX1P47902 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDX1P47902 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.72□□□□□ -0.05
CDX1P47902 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDX1P47902 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.72□□□□□ -0.05
CDX1P47902 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDX1P47902 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CDX1P47902 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDX1P47902 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CDX1P47902 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDX1P47902 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDX1P47902 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.72□□□□□ -0.05
CDX1P47902 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.72□□□□□ -0.05
CDX1P47902 AP003041.3-201ENST00000527151 707 ntBASIC14.72□□□□□ -0.05
CDX1P47902 AL049597.2-201ENST00000565575 961 ntBASIC14.72□□□□□ -0.05
CDX1P47902 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDX1P47902 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CDX1P47902 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDX1P47902 PKD1P1-201ENST00000458669 6805 ntBASIC14.72□□□□□ -0.05
CDX1P47902 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms