Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC011558.1-201ENST00000623459 338 ntBASIC18.77■□□□□ 0.6
MMP13P45452 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP13P45452 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.77■□□□□ 0.6
MMP13P45452 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.77■□□□□ 0.6
MMP13P45452 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MMP13P45452 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.77■□□□□ 0.6
MMP13P45452 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MMP13P45452 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.77■□□□□ 0.59
MMP13P45452 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MMP13P45452 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP13P45452 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MMP13P45452 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
MMP13P45452 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MMP13P45452 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MMP13P45452 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP13P45452 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
MMP13P45452 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
MMP13P45452 FLJ13224-201ENST00000313737 1514 ntBASIC18.76■□□□□ 0.59
MMP13P45452 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
MMP13P45452 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MMP13P45452 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP13P45452 MIR149-201ENST00000384879 89 ntBASIC18.76■□□□□ 0.59
MMP13P45452 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
MMP13P45452 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
MMP13P45452 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.76■□□□□ 0.59
MMP13P45452 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP13P45452 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.76■□□□□ 0.59
MMP13P45452 MIR3917-201ENST00000580971 93 ntBASIC18.76■□□□□ 0.59
MMP13P45452 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.76■□□□□ 0.59
MMP13P45452 AC006011.2-201ENST00000621313 1158 ntBASIC18.76■□□□□ 0.59
MMP13P45452 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP13P45452 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
MMP13P45452 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MMP13P45452 AC099343.3-201ENST00000605834 2503 ntBASIC18.76■□□□□ 0.59
MMP13P45452 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.76■□□□□ 0.59
MMP13P45452 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MMP13P45452 AC009102.3-201ENST00000623118 1491 ntBASIC18.76■□□□□ 0.59
MMP13P45452 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MMP13P45452 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.76■□□□□ 0.59
MMP13P45452 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
MMP13P45452 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP13P45452 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
MMP13P45452 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MMP13P45452 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.75■□□□□ 0.59
MMP13P45452 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP13P45452 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP13P45452 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.75■□□□□ 0.59
MMP13P45452 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.75■□□□□ 0.59
MMP13P45452 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP13P45452 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP13P45452 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
MMP13P45452 TNRC18P3-201ENST00000441896 2691 ntBASIC18.75■□□□□ 0.59
MMP13P45452 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MMP13P45452 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.75■□□□□ 0.59
MMP13P45452 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP13P45452 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MMP13P45452 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MMP13P45452 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP13P45452 TMPOP1-202ENST00000424642 1267 ntBASIC18.75■□□□□ 0.59
MMP13P45452 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.75■□□□□ 0.59
MMP13P45452 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.75■□□□□ 0.59
MMP13P45452 KRT18P21-201ENST00000515767 1272 ntBASIC18.75■□□□□ 0.59
MMP13P45452 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.75■□□□□ 0.59
MMP13P45452 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.75■□□□□ 0.59
MMP13P45452 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.75■□□□□ 0.59
MMP13P45452 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP13P45452 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MMP13P45452 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MMP13P45452 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP13P45452 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP13P45452 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MMP13P45452 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.75■□□□□ 0.59
MMP13P45452 AC138932.1-201ENST00000534164 6830 ntBASIC18.74■□□□□ 0.59
MMP13P45452 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MMP13P45452 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MMP13P45452 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP13P45452 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP13P45452 PP12613-201ENST00000424958 2230 ntBASIC18.74■□□□□ 0.59
MMP13P45452 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MMP13P45452 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
MMP13P45452 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MMP13P45452 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.74■□□□□ 0.59
MMP13P45452 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP13P45452 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP13P45452 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.74■□□□□ 0.59
MMP13P45452 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.74■□□□□ 0.59
MMP13P45452 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP13P45452 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP13P45452 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
MMP13P45452 AK4P3-201ENST00000418260 669 ntBASIC18.74■□□□□ 0.59
MMP13P45452 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MMP13P45452 AC034232.1-201ENST00000506026 1064 ntBASIC18.74■□□□□ 0.59
MMP13P45452 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.74■□□□□ 0.59
MMP13P45452 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.74■□□□□ 0.59
MMP13P45452 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.74■□□□□ 0.59
MMP13P45452 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.74■□□□□ 0.59
MMP13P45452 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP13P45452 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP13P45452 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MMP13P45452 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms