Protein–RNA interactions for Protein: P36954

POLR2I, DNA-directed RNA polymerase II subunit RPB9, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2IP36954 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
POLR2IP36954 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2IP36954 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
POLR2IP36954 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2IP36954 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
POLR2IP36954 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2IP36954 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
POLR2IP36954 NIFKP9-201ENST00000419265 221 ntBASIC16.62■□□□□ 0.25
POLR2IP36954 AC069152.1-201ENST00000438030 544 ntBASIC16.62■□□□□ 0.25
POLR2IP36954 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.62■□□□□ 0.25
POLR2IP36954 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.62■□□□□ 0.25
POLR2IP36954 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.62■□□□□ 0.25
POLR2IP36954 AC069544.1-201ENST00000609399 999 ntBASIC16.62■□□□□ 0.25
POLR2IP36954 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
POLR2IP36954 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
POLR2IP36954 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
POLR2IP36954 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
POLR2IP36954 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.62■□□□□ 0.25
POLR2IP36954 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2IP36954 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2IP36954 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.62■□□□□ 0.25
POLR2IP36954 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2IP36954 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
POLR2IP36954 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2IP36954 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2IP36954 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR2IP36954 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2IP36954 FLJ38576-201ENST00000623820 2459 ntBASIC16.61■□□□□ 0.25
POLR2IP36954 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.61■□□□□ 0.25
POLR2IP36954 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2IP36954 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR2IP36954 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
POLR2IP36954 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
POLR2IP36954 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR2IP36954 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2IP36954 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2IP36954 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
POLR2IP36954 AC011298.2-201ENST00000617989 482 ntBASIC16.61■□□□□ 0.25
POLR2IP36954 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
POLR2IP36954 AC133041.1-202ENST00000642053 222 ntBASIC16.61■□□□□ 0.25
POLR2IP36954 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2IP36954 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
POLR2IP36954 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2IP36954 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2IP36954 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.61■□□□□ 0.25
POLR2IP36954 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
POLR2IP36954 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2IP36954 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2IP36954 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2IP36954 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2IP36954 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2IP36954 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2IP36954 AL596257.1-201ENST00000641463 2694 ntBASIC16.61■□□□□ 0.25
POLR2IP36954 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.61■□□□□ 0.25
POLR2IP36954 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.61■□□□□ 0.25
POLR2IP36954 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2IP36954 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR2IP36954 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2IP36954 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2IP36954 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR2IP36954 DOC2GP-204ENST00000639052 2548 ntBASIC16.6■□□□□ 0.25
POLR2IP36954 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
POLR2IP36954 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2IP36954 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.6■□□□□ 0.25
POLR2IP36954 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2IP36954 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2IP36954 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2IP36954 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
POLR2IP36954 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2IP36954 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.6■□□□□ 0.25
POLR2IP36954 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR2IP36954 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR2IP36954 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2IP36954 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2IP36954 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2IP36954 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2IP36954 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.6■□□□□ 0.25
POLR2IP36954 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2IP36954 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.6■□□□□ 0.25
POLR2IP36954 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2IP36954 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2IP36954 AC009102.3-201ENST00000623118 1491 ntBASIC16.6■□□□□ 0.25
POLR2IP36954 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
POLR2IP36954 LINC02199-201ENST00000506655 2702 ntBASIC16.6■□□□□ 0.25
POLR2IP36954 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2IP36954 AL138688.1-201ENST00000624851 1594 ntBASIC16.6■□□□□ 0.25
POLR2IP36954 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
POLR2IP36954 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.59■□□□□ 0.25
POLR2IP36954 AC008741.2-201ENST00000612792 3115 ntBASIC16.59■□□□□ 0.25
POLR2IP36954 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.59■□□□□ 0.25
POLR2IP36954 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR2IP36954 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2IP36954 AC100803.2-201ENST00000562459 1963 ntBASIC16.59■□□□□ 0.25
POLR2IP36954 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
POLR2IP36954 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2IP36954 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2IP36954 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
POLR2IP36954 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2IP36954 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2IP36954 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms