Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 AC034232.1-201ENST00000506026 1064 ntBASIC19■□□□□ 0.63
PCK1P35558 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19■□□□□ 0.63
PCK1P35558 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19■□□□□ 0.63
PCK1P35558 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCK1P35558 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCK1P35558 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19■□□□□ 0.63
PCK1P35558 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19■□□□□ 0.63
PCK1P35558 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19■□□□□ 0.63
PCK1P35558 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCK1P35558 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19■□□□□ 0.63
PCK1P35558 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCK1P35558 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCK1P35558 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCK1P35558 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCK1P35558 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCK1P35558 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCK1P35558 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PCK1P35558 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCK1P35558 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
PCK1P35558 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
PCK1P35558 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCK1P35558 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19■□□□□ 0.63
PCK1P35558 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19■□□□□ 0.63
PCK1P35558 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCK1P35558 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19■□□□□ 0.63
PCK1P35558 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCK1P35558 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19■□□□□ 0.63
PCK1P35558 AC073508.3-201ENST00000619697 1419 ntBASIC19■□□□□ 0.63
PCK1P35558 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCK1P35558 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
PCK1P35558 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCK1P35558 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCK1P35558 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCK1P35558 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PCK1P35558 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCK1P35558 TERF1P1-201ENST00000311003 1181 ntBASIC18.99■□□□□ 0.63
PCK1P35558 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCK1P35558 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.99■□□□□ 0.63
PCK1P35558 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCK1P35558 COX11P1-201ENST00000489116 835 ntBASIC18.99■□□□□ 0.63
PCK1P35558 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PCK1P35558 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PCK1P35558 AC140113.3-201ENST00000605663 199 ntBASIC18.99■□□□□ 0.63
PCK1P35558 AL023973.1-201ENST00000624619 620 ntBASIC18.99■□□□□ 0.63
PCK1P35558 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PCK1P35558 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCK1P35558 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCK1P35558 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCK1P35558 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCK1P35558 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCK1P35558 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCK1P35558 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCK1P35558 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PCK1P35558 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCK1P35558 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCK1P35558 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCK1P35558 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCK1P35558 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.99■□□□□ 0.63
PCK1P35558 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.99■□□□□ 0.63
PCK1P35558 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PCK1P35558 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.98■□□□□ 0.63
PCK1P35558 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.98■□□□□ 0.63
PCK1P35558 AC068880.1-201ENST00000507289 2297 ntBASIC18.98■□□□□ 0.63
PCK1P35558 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.98■□□□□ 0.63
PCK1P35558 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.98■□□□□ 0.63
PCK1P35558 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PCK1P35558 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 AL137013.1-201ENST00000432946 1228 ntBASIC18.98■□□□□ 0.63
PCK1P35558 BX664615.1-201ENST00000443558 458 ntBASIC18.98■□□□□ 0.63
PCK1P35558 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.98■□□□□ 0.63
PCK1P35558 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.98■□□□□ 0.63
PCK1P35558 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCK1P35558 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.98■□□□□ 0.63
PCK1P35558 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
PCK1P35558 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
PCK1P35558 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCK1P35558 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCK1P35558 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCK1P35558 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCK1P35558 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms