Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSP1P33241 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
LSP1P33241 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSP1P33241 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSP1P33241 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSP1P33241 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.11■□□□□ 0.49
LSP1P33241 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSP1P33241 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LSP1P33241 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.11■□□□□ 0.49
LSP1P33241 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSP1P33241 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.11■□□□□ 0.49
LSP1P33241 IKBKGP1-201ENST00000612193 1073 ntBASIC18.11■□□□□ 0.49
LSP1P33241 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LSP1P33241 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.11■□□□□ 0.49
LSP1P33241 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSP1P33241 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.11■□□□□ 0.49
LSP1P33241 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LSP1P33241 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.11■□□□□ 0.49
LSP1P33241 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSP1P33241 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LSP1P33241 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LSP1P33241 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LSP1P33241 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.11■□□□□ 0.49
LSP1P33241 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSP1P33241 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.11■□□□□ 0.49
LSP1P33241 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LSP1P33241 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSP1P33241 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSP1P33241 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LSP1P33241 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSP1P33241 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LSP1P33241 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.1■□□□□ 0.49
LSP1P33241 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSP1P33241 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.1■□□□□ 0.49
LSP1P33241 LINC00304-203ENST00000565008 1864 ntBASIC18.1■□□□□ 0.49
LSP1P33241 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LSP1P33241 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.1■□□□□ 0.49
LSP1P33241 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.1■□□□□ 0.49
LSP1P33241 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.1■□□□□ 0.49
LSP1P33241 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.1■□□□□ 0.49
LSP1P33241 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LSP1P33241 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSP1P33241 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSP1P33241 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
LSP1P33241 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSP1P33241 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LSP1P33241 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LSP1P33241 AC060834.1-201ENST00000443027 2032 ntBASIC18.1■□□□□ 0.49
LSP1P33241 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LSP1P33241 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.1■□□□□ 0.49
LSP1P33241 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSP1P33241 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSP1P33241 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSP1P33241 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSP1P33241 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSP1P33241 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
LSP1P33241 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSP1P33241 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
LSP1P33241 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LSP1P33241 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSP1P33241 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSP1P33241 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LSP1P33241 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
LSP1P33241 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LSP1P33241 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.09■□□□□ 0.49
LSP1P33241 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.09■□□□□ 0.49
LSP1P33241 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.09■□□□□ 0.49
LSP1P33241 AC231657.2-201ENST00000624556 255 ntBASIC18.09■□□□□ 0.49
LSP1P33241 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LSP1P33241 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LSP1P33241 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSP1P33241 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSP1P33241 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LSP1P33241 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LSP1P33241 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSP1P33241 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.09■□□□□ 0.49
LSP1P33241 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LSP1P33241 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LSP1P33241 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.09■□□□□ 0.49
LSP1P33241 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSP1P33241 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSP1P33241 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.09■□□□□ 0.49
LSP1P33241 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSP1P33241 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSP1P33241 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LSP1P33241 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.09■□□□□ 0.49
LSP1P33241 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSP1P33241 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LSP1P33241 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.08■□□□□ 0.49
LSP1P33241 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
LSP1P33241 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LSP1P33241 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
LSP1P33241 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LSP1P33241 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LSP1P33241 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LSP1P33241 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
LSP1P33241 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LSP1P33241 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.08■□□□□ 0.49
LSP1P33241 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
LSP1P33241 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms