Protein–RNA interactions for Protein: P32246

CCR1, C-C chemokine receptor type 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1P32246 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCR1P32246 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.66■□□□□ 0.58
CCR1P32246 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCR1P32246 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCR1P32246 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCR1P32246 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.66■□□□□ 0.58
CCR1P32246 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCR1P32246 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.66■□□□□ 0.58
CCR1P32246 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCR1P32246 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCR1P32246 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCR1P32246 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.65■□□□□ 0.58
CCR1P32246 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.65■□□□□ 0.58
CCR1P32246 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 AC138028.4-201ENST00000564984 1845 ntBASIC18.65■□□□□ 0.58
CCR1P32246 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 AC246785.2-201ENST00000432512 513 ntBASIC18.65■□□□□ 0.58
CCR1P32246 HCG4P8-203ENST00000443049 980 ntBASIC18.65■□□□□ 0.58
CCR1P32246 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CCR1P32246 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.65■□□□□ 0.58
CCR1P32246 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.65■□□□□ 0.58
CCR1P32246 AC112698.1-201ENST00000510299 916 ntBASIC18.65■□□□□ 0.58
CCR1P32246 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.65■□□□□ 0.58
CCR1P32246 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.65■□□□□ 0.58
CCR1P32246 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 AL353801.3-201ENST00000609898 542 ntBASIC18.65■□□□□ 0.58
CCR1P32246 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CCR1P32246 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCR1P32246 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.65■□□□□ 0.58
CCR1P32246 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.65■□□□□ 0.58
CCR1P32246 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCR1P32246 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.64■□□□□ 0.58
CCR1P32246 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
CCR1P32246 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
CCR1P32246 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCR1P32246 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCR1P32246 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.64■□□□□ 0.58
CCR1P32246 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCR1P32246 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.64■□□□□ 0.58
CCR1P32246 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCR1P32246 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
CCR1P32246 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCR1P32246 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCR1P32246 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCR1P32246 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCR1P32246 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCR1P32246 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCR1P32246 AP000997.3-201ENST00000623333 2250 ntBASIC18.64■□□□□ 0.57
CCR1P32246 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCR1P32246 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCR1P32246 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCR1P32246 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CCR1P32246 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCR1P32246 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.64■□□□□ 0.57
CCR1P32246 LINC00265-3P-201ENST00000447588 903 ntBASIC18.64■□□□□ 0.57
CCR1P32246 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.64■□□□□ 0.57
CCR1P32246 TOB2P1-201ENST00000469761 992 ntBASIC18.64■□□□□ 0.57
CCR1P32246 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.64■□□□□ 0.57
CCR1P32246 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.64■□□□□ 0.57
CCR1P32246 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.64■□□□□ 0.57
CCR1P32246 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.64■□□□□ 0.57
CCR1P32246 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCR1P32246 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCR1P32246 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCR1P32246 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCR1P32246 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCR1P32246 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.64■□□□□ 0.57
CCR1P32246 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCR1P32246 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCR1P32246 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCR1P32246 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCR1P32246 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCR1P32246 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.63■□□□□ 0.57
CCR1P32246 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCR1P32246 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCR1P32246 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCR1P32246 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.63■□□□□ 0.57
CCR1P32246 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCR1P32246 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCR1P32246 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.63■□□□□ 0.57
CCR1P32246 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms