Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.6■□□□□ 0.25
ABCD3P28288 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ABCD3P28288 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ABCD3P28288 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ABCD3P28288 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.6■□□□□ 0.25
ABCD3P28288 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ABCD3P28288 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ABCD3P28288 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ABCD3P28288 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ABCD3P28288 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ABCD3P28288 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ABCD3P28288 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
ABCD3P28288 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ABCD3P28288 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ABCD3P28288 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ABCD3P28288 AC068472.1-201ENST00000474589 881 ntBASIC16.6■□□□□ 0.25
ABCD3P28288 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.6■□□□□ 0.25
ABCD3P28288 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ABCD3P28288 AP002414.4-201ENST00000589764 1148 ntBASIC16.6■□□□□ 0.25
ABCD3P28288 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.6■□□□□ 0.25
ABCD3P28288 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.6■□□□□ 0.25
ABCD3P28288 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.6■□□□□ 0.25
ABCD3P28288 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
ABCD3P28288 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ABCD3P28288 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ABCD3P28288 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.6■□□□□ 0.25
ABCD3P28288 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ABCD3P28288 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.6■□□□□ 0.25
ABCD3P28288 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ABCD3P28288 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ABCD3P28288 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ABCD3P28288 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
ABCD3P28288 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.6■□□□□ 0.25
ABCD3P28288 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ABCD3P28288 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ABCD3P28288 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.59■□□□□ 0.25
ABCD3P28288 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ABCD3P28288 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ABCD3P28288 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.59■□□□□ 0.25
ABCD3P28288 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ABCD3P28288 AL390961.4-201ENST00000623958 2535 ntBASIC16.59■□□□□ 0.25
ABCD3P28288 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ABCD3P28288 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ABCD3P28288 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ABCD3P28288 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ABCD3P28288 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ABCD3P28288 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.59■□□□□ 0.25
ABCD3P28288 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.59■□□□□ 0.25
ABCD3P28288 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ABCD3P28288 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.59■□□□□ 0.25
ABCD3P28288 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.59■□□□□ 0.25
ABCD3P28288 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.59■□□□□ 0.25
ABCD3P28288 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.59■□□□□ 0.25
ABCD3P28288 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ABCD3P28288 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.59■□□□□ 0.25
ABCD3P28288 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
ABCD3P28288 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ABCD3P28288 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ABCD3P28288 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ABCD3P28288 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ABCD3P28288 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ABCD3P28288 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ABCD3P28288 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.59■□□□□ 0.25
ABCD3P28288 AP000997.3-201ENST00000623333 2250 ntBASIC16.59■□□□□ 0.25
ABCD3P28288 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
ABCD3P28288 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.59■□□□□ 0.25
ABCD3P28288 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ABCD3P28288 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ABCD3P28288 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.59■□□□□ 0.25
ABCD3P28288 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.59■□□□□ 0.25
ABCD3P28288 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ABCD3P28288 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ABCD3P28288 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ABCD3P28288 AC138028.4-201ENST00000564984 1845 ntBASIC16.59■□□□□ 0.25
ABCD3P28288 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ABCD3P28288 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ABCD3P28288 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
ABCD3P28288 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ABCD3P28288 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ABCD3P28288 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ABCD3P28288 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ABCD3P28288 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ABCD3P28288 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ABCD3P28288 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ABCD3P28288 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.25
ABCD3P28288 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ABCD3P28288 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ABCD3P28288 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
ABCD3P28288 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ABCD3P28288 DRAXINP1-201ENST00000437611 948 ntBASIC16.58■□□□□ 0.24
ABCD3P28288 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.58■□□□□ 0.24
ABCD3P28288 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.58■□□□□ 0.24
ABCD3P28288 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ABCD3P28288 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
ABCD3P28288 MIR3180-1-201ENST00000580374 94 ntBASIC16.58■□□□□ 0.24
ABCD3P28288 MIR3180-3-201ENST00000584616 94 ntBASIC16.58■□□□□ 0.24
ABCD3P28288 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ABCD3P28288 AC022898.2-201ENST00000616822 1312 ntBASIC16.58■□□□□ 0.24
ABCD3P28288 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.58■□□□□ 0.24
ABCD3P28288 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms