Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN3P20807 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN3P20807 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN3P20807 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CAPN3P20807 HCG11-201ENST00000411553 5696 ntBASIC17.38■□□□□ 0.37
CAPN3P20807 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN3P20807 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CAPN3P20807 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.38■□□□□ 0.37
CAPN3P20807 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CAPN3P20807 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN3P20807 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CAPN3P20807 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CAPN3P20807 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN3P20807 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN3P20807 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN3P20807 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CAPN3P20807 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPN3P20807 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN3P20807 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN3P20807 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN3P20807 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPN3P20807 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN3P20807 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.37■□□□□ 0.37
CAPN3P20807 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.37■□□□□ 0.37
CAPN3P20807 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.37■□□□□ 0.37
CAPN3P20807 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN3P20807 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN3P20807 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.37■□□□□ 0.37
CAPN3P20807 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CAPN3P20807 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.37■□□□□ 0.37
CAPN3P20807 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CAPN3P20807 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN3P20807 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPN3P20807 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPN3P20807 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN3P20807 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN3P20807 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN3P20807 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN3P20807 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CAPN3P20807 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN3P20807 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN3P20807 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN3P20807 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN3P20807 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN3P20807 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN3P20807 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN3P20807 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CAPN3P20807 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN3P20807 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.36■□□□□ 0.37
CAPN3P20807 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN3P20807 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN3P20807 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CAPN3P20807 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN3P20807 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.36■□□□□ 0.37
CAPN3P20807 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN3P20807 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN3P20807 SLC25A3P1-201ENST00000443844 931 ntBASIC17.36■□□□□ 0.37
CAPN3P20807 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPN3P20807 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPN3P20807 SLC25A1P4-201ENST00000567977 778 ntBASIC17.36■□□□□ 0.37
CAPN3P20807 AC091076.1-201ENST00000610741 619 ntBASIC17.36■□□□□ 0.37
CAPN3P20807 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CAPN3P20807 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN3P20807 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CAPN3P20807 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN3P20807 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CAPN3P20807 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN3P20807 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN3P20807 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CAPN3P20807 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN3P20807 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.36■□□□□ 0.37
CAPN3P20807 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CAPN3P20807 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CAPN3P20807 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN3P20807 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN3P20807 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.36■□□□□ 0.37
CAPN3P20807 AC022211.2-201ENST00000585075 2527 ntBASIC17.36■□□□□ 0.37
CAPN3P20807 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN3P20807 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.35■□□□□ 0.37
CAPN3P20807 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.35■□□□□ 0.37
CAPN3P20807 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CAPN3P20807 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN3P20807 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN3P20807 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CAPN3P20807 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN3P20807 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN3P20807 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN3P20807 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CAPN3P20807 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN3P20807 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.35■□□□□ 0.37
CAPN3P20807 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPN3P20807 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.35■□□□□ 0.37
CAPN3P20807 FITM1-202ENST00000559294 800 ntBASIC17.35■□□□□ 0.37
CAPN3P20807 LINC01238-205ENST00000567549 1107 ntBASIC17.35■□□□□ 0.37
CAPN3P20807 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPN3P20807 AP000525.1-201ENST00000608286 694 ntBASIC17.35■□□□□ 0.37
CAPN3P20807 REXO1L10P-201ENST00000615707 1290 ntBASIC17.35■□□□□ 0.37
CAPN3P20807 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN3P20807 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN3P20807 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms