Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NFKB1P19838 HBZP1-201ENST00000354915 429 ntBASIC18.36■□□□□ 0.53
NFKB1P19838 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NFKB1P19838 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NFKB1P19838 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NFKB1P19838 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NFKB1P19838 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NFKB1P19838 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.36■□□□□ 0.53
NFKB1P19838 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NFKB1P19838 KRT18P48-201ENST00000434763 852 ntBASIC18.36■□□□□ 0.53
NFKB1P19838 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.36■□□□□ 0.53
NFKB1P19838 AC063952.2-201ENST00000498792 1227 ntBASIC18.36■□□□□ 0.53
NFKB1P19838 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.36■□□□□ 0.53
NFKB1P19838 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NFKB1P19838 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.36■□□□□ 0.53
NFKB1P19838 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
NFKB1P19838 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.36■□□□□ 0.53
NFKB1P19838 HYMAI.1-201ENST00000620949 238 ntBASIC18.36■□□□□ 0.53
NFKB1P19838 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.36■□□□□ 0.53
NFKB1P19838 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
NFKB1P19838 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NFKB1P19838 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 AC012317.2-201ENST00000623305 2251 ntBASIC18.35■□□□□ 0.53
NFKB1P19838 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 AC100803.2-201ENST00000562459 1963 ntBASIC18.35■□□□□ 0.53
NFKB1P19838 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NFKB1P19838 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NFKB1P19838 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NFKB1P19838 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 AC026471.1-201ENST00000564629 3026 ntBASIC18.35■□□□□ 0.53
NFKB1P19838 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
NFKB1P19838 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.35■□□□□ 0.53
NFKB1P19838 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.35■□□□□ 0.53
NFKB1P19838 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.35■□□□□ 0.53
NFKB1P19838 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 DUX4L26-201ENST00000489078 1255 ntBASIC18.35■□□□□ 0.53
NFKB1P19838 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.35■□□□□ 0.53
NFKB1P19838 VENTXP5-201ENST00000523979 775 ntBASIC18.35■□□□□ 0.53
NFKB1P19838 AC022616.7-201ENST00000525383 220 ntBASIC18.35■□□□□ 0.53
NFKB1P19838 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.35■□□□□ 0.53
NFKB1P19838 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.35■□□□□ 0.53
NFKB1P19838 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.35■□□□□ 0.53
NFKB1P19838 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.35■□□□□ 0.53
NFKB1P19838 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.35■□□□□ 0.53
NFKB1P19838 AC004263.2-201ENST00000617183 678 ntBASIC18.35■□□□□ 0.53
NFKB1P19838 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.35■□□□□ 0.53
NFKB1P19838 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NFKB1P19838 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NFKB1P19838 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.34■□□□□ 0.53
NFKB1P19838 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NFKB1P19838 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NFKB1P19838 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NFKB1P19838 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NFKB1P19838 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NFKB1P19838 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NFKB1P19838 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.34■□□□□ 0.53
NFKB1P19838 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NFKB1P19838 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NFKB1P19838 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NFKB1P19838 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NFKB1P19838 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NFKB1P19838 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.34■□□□□ 0.53
NFKB1P19838 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NFKB1P19838 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.34■□□□□ 0.53
NFKB1P19838 KRT18P21-201ENST00000515767 1272 ntBASIC18.34■□□□□ 0.53
NFKB1P19838 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.34■□□□□ 0.53
NFKB1P19838 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.34■□□□□ 0.53
NFKB1P19838 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.34■□□□□ 0.53
NFKB1P19838 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.34■□□□□ 0.53
NFKB1P19838 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.34■□□□□ 0.53
NFKB1P19838 GNAS-203ENST00000306120 1878 ntBASIC18.34■□□□□ 0.53
NFKB1P19838 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.34■□□□□ 0.53
NFKB1P19838 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.34■□□□□ 0.53
NFKB1P19838 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NFKB1P19838 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NFKB1P19838 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NFKB1P19838 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NFKB1P19838 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NFKB1P19838 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NFKB1P19838 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms