Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TOP1P11387 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TOP1P11387 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TOP1P11387 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TOP1P11387 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TOP1P11387 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TOP1P11387 AC246785.2-201ENST00000432512 513 ntBASIC21.16■□□□□ 0.98
TOP1P11387 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TOP1P11387 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.16■□□□□ 0.98
TOP1P11387 AC068472.1-201ENST00000474589 881 ntBASIC21.16■□□□□ 0.98
TOP1P11387 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.16■□□□□ 0.98
TOP1P11387 AC011840.4-201ENST00000578471 627 ntBASIC21.16■□□□□ 0.98
TOP1P11387 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.16■□□□□ 0.98
TOP1P11387 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TOP1P11387 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.16■□□□□ 0.98
TOP1P11387 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TOP1P11387 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.16■□□□□ 0.98
TOP1P11387 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TOP1P11387 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TOP1P11387 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.16■□□□□ 0.98
TOP1P11387 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.16■□□□□ 0.98
TOP1P11387 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TOP1P11387 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TOP1P11387 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TOP1P11387 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TOP1P11387 PHGDH-209ENST00000641074 1780 ntBASIC21.15■□□□□ 0.98
TOP1P11387 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.15■□□□□ 0.98
TOP1P11387 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TOP1P11387 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TOP1P11387 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.15■□□□□ 0.98
TOP1P11387 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.15■□□□□ 0.98
TOP1P11387 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TOP1P11387 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TOP1P11387 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TOP1P11387 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TOP1P11387 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TOP1P11387 KRT18P65-201ENST00000439811 1286 ntBASIC21.15■□□□□ 0.98
TOP1P11387 NUS1P1-201ENST00000446295 882 ntBASIC21.15■□□□□ 0.98
TOP1P11387 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.15■□□□□ 0.98
TOP1P11387 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.15■□□□□ 0.98
TOP1P11387 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TOP1P11387 KRT126P-201ENST00000549467 1181 ntBASIC21.15■□□□□ 0.98
TOP1P11387 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.15■□□□□ 0.98
TOP1P11387 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TOP1P11387 Z69720.1-201ENST00000601483 472 ntBASIC21.15■□□□□ 0.98
TOP1P11387 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TOP1P11387 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TOP1P11387 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TOP1P11387 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TOP1P11387 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TOP1P11387 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.15■□□□□ 0.98
TOP1P11387 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TOP1P11387 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TOP1P11387 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
TOP1P11387 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TOP1P11387 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TOP1P11387 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TOP1P11387 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.14■□□□□ 0.98
TOP1P11387 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TOP1P11387 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.14■□□□□ 0.98
TOP1P11387 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.98
TOP1P11387 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TOP1P11387 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TOP1P11387 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TOP1P11387 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TOP1P11387 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.14■□□□□ 0.97
TOP1P11387 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.14■□□□□ 0.97
TOP1P11387 KRT17P6-201ENST00000453795 1220 ntBASIC21.14■□□□□ 0.97
TOP1P11387 VENTXP7-201ENST00000475503 772 ntBASIC21.14■□□□□ 0.97
TOP1P11387 AC091607.1-201ENST00000490318 1060 ntBASIC21.14■□□□□ 0.97
TOP1P11387 AC104819.1-201ENST00000504587 486 ntBASIC21.14■□□□□ 0.97
TOP1P11387 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TOP1P11387 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.14■□□□□ 0.97
TOP1P11387 AC074051.2-201ENST00000565115 352 ntBASIC21.14■□□□□ 0.97
TOP1P11387 PRELID1P1-202ENST00000567272 903 ntBASIC21.14■□□□□ 0.97
TOP1P11387 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.14■□□□□ 0.97
TOP1P11387 AP005901.3-202ENST00000581653 237 ntBASIC21.14■□□□□ 0.97
TOP1P11387 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.14■□□□□ 0.97
TOP1P11387 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TOP1P11387 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TOP1P11387 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TOP1P11387 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TOP1P11387 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TOP1P11387 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.14■□□□□ 0.97
TOP1P11387 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TOP1P11387 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TOP1P11387 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.13■□□□□ 0.97
TOP1P11387 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.13■□□□□ 0.97
TOP1P11387 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TOP1P11387 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TOP1P11387 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TOP1P11387 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TOP1P11387 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TOP1P11387 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TOP1P11387 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TOP1P11387 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.13■□□□□ 0.97
TOP1P11387 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TOP1P11387 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.13■□□□□ 0.97
TOP1P11387 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
TOP1P11387 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms