Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 MTCL1P1-201ENST00000446207 792 ntBASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 AC009533.2-201ENST00000543664 586 ntBASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 KRT18P65-201ENST00000439811 1286 ntBASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 AC005336.2-201ENST00000593183 939 ntBASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40ALP0C0E4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB40ALP0C0E4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40ALP0C0E4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms