Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.7■□□□□ 0.1
SFTPBP07988 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.7■□□□□ 0.1
SFTPBP07988 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.7■□□□□ 0.1
SFTPBP07988 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.7■□□□□ 0.1
SFTPBP07988 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SFTPBP07988 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SFTPBP07988 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SFTPBP07988 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SFTPBP07988 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SFTPBP07988 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SFTPBP07988 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SFTPBP07988 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SFTPBP07988 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SFTPBP07988 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SFTPBP07988 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SFTPBP07988 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SFTPBP07988 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SFTPBP07988 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SFTPBP07988 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.69■□□□□ 0.1
SFTPBP07988 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SFTPBP07988 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.69■□□□□ 0.1
SFTPBP07988 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SFTPBP07988 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SFTPBP07988 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.69■□□□□ 0.1
SFTPBP07988 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SFTPBP07988 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SFTPBP07988 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.69■□□□□ 0.1
SFTPBP07988 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SFTPBP07988 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SFTPBP07988 TMPOP1-202ENST00000424642 1267 ntBASIC15.69■□□□□ 0.1
SFTPBP07988 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.69■□□□□ 0.1
SFTPBP07988 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.69■□□□□ 0.1
SFTPBP07988 MIR4674-201ENST00000582457 87 ntBASIC15.69■□□□□ 0.1
SFTPBP07988 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SFTPBP07988 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SFTPBP07988 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SFTPBP07988 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SFTPBP07988 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SFTPBP07988 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SFTPBP07988 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SFTPBP07988 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SFTPBP07988 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SFTPBP07988 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SFTPBP07988 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SFTPBP07988 KRT8P50-201ENST00000562022 1438 ntBASIC15.68■□□□□ 0.1
SFTPBP07988 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
SFTPBP07988 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.68■□□□□ 0.1
SFTPBP07988 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SFTPBP07988 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SFTPBP07988 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFTPBP07988 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SFTPBP07988 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SFTPBP07988 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.68■□□□□ 0.1
SFTPBP07988 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.68■□□□□ 0.1
SFTPBP07988 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFTPBP07988 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.68■□□□□ 0.1
SFTPBP07988 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFTPBP07988 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.68■□□□□ 0.1
SFTPBP07988 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.68■□□□□ 0.1
SFTPBP07988 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFTPBP07988 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SFTPBP07988 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.68■□□□□ 0.1
SFTPBP07988 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.68■□□□□ 0.1
SFTPBP07988 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFTPBP07988 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SFTPBP07988 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFTPBP07988 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.68■□□□□ 0.1
SFTPBP07988 AP000593.1-201ENST00000393668 712 ntBASIC15.68■□□□□ 0.1
SFTPBP07988 MIR1224-201ENST00000408193 85 ntBASIC15.68■□□□□ 0.1
SFTPBP07988 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SFTPBP07988 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SFTPBP07988 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
SFTPBP07988 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.68■□□□□ 0.1
SFTPBP07988 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.68■□□□□ 0.1
SFTPBP07988 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFTPBP07988 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.68■□□□□ 0.1
SFTPBP07988 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFTPBP07988 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFTPBP07988 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SFTPBP07988 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.68■□□□□ 0.1
SFTPBP07988 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.68■□□□□ 0.1
SFTPBP07988 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SFTPBP07988 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFTPBP07988 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.68■□□□□ 0.1
SFTPBP07988 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SFTPBP07988 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
SFTPBP07988 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SFTPBP07988 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.68■□□□□ 0.1
SFTPBP07988 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SFTPBP07988 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SFTPBP07988 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.67■□□□□ 0.1
SFTPBP07988 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SFTPBP07988 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.67■□□□□ 0.1
SFTPBP07988 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SFTPBP07988 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
SFTPBP07988 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SFTPBP07988 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SFTPBP07988 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SFTPBP07988 REXO1L9P-201ENST00000604264 2108 ntBASIC15.67■□□□□ 0.1
SFTPBP07988 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms