Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 AL596275.1-201ENST00000423464 877 ntBASIC16.24■□□□□ 0.19
HLA-DPB1P04440 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 PRSS44-201ENST00000515154 1146 ntBASIC16.24■□□□□ 0.19
HLA-DPB1P04440 SLC25A1P4-201ENST00000567977 778 ntBASIC16.24■□□□□ 0.19
HLA-DPB1P04440 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.24■□□□□ 0.19
HLA-DPB1P04440 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms