Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
P04436 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
P04436 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
P04436 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P04436 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
P04436 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
P04436 AC004408.2-201ENST00000623613 2777 ntBASIC16.46■□□□□ 0.23
P04436 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P04436 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.46■□□□□ 0.23
P04436 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
P04436 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
P04436 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.46■□□□□ 0.22
P04436 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.46■□□□□ 0.22
P04436 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
P04436 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
P04436 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
P04436 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P04436 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P04436 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P04436 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
P04436 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
P04436 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
P04436 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
P04436 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
P04436 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
P04436 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
P04436 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
P04436 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
P04436 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
P04436 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
P04436 NUS1P2-201ENST00000417358 873 ntBASIC16.45■□□□□ 0.22
P04436 POM121L3P-201ENST00000419331 1163 ntBASIC16.45■□□□□ 0.22
P04436 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.45■□□□□ 0.22
P04436 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.45■□□□□ 0.22
P04436 KRT18P31-201ENST00000506277 1292 ntBASIC16.45■□□□□ 0.22
P04436 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.45■□□□□ 0.22
P04436 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.45■□□□□ 0.22
P04436 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
P04436 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.45■□□□□ 0.22
P04436 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.45■□□□□ 0.22
P04436 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.45■□□□□ 0.22
P04436 AL732292.2-201ENST00000609649 430 ntBASIC16.45■□□□□ 0.22
P04436 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.45■□□□□ 0.22
P04436 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.45■□□□□ 0.22
P04436 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
P04436 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.45■□□□□ 0.22
P04436 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
P04436 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
P04436 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.45■□□□□ 0.22
P04436 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
P04436 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
P04436 AC022898.2-201ENST00000616822 1312 ntBASIC16.45■□□□□ 0.22
P04436 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
P04436 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.44■□□□□ 0.22
P04436 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
P04436 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
P04436 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
P04436 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 AC004870.1-201ENST00000315132 882 ntBASIC16.44■□□□□ 0.22
P04436 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
P04436 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.44■□□□□ 0.22
P04436 KRT16P4-201ENST00000453883 522 ntBASIC16.44■□□□□ 0.22
P04436 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.44■□□□□ 0.22
P04436 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.44■□□□□ 0.22
P04436 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
P04436 AC112698.1-201ENST00000510299 916 ntBASIC16.44■□□□□ 0.22
P04436 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
P04436 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.44■□□□□ 0.22
P04436 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.44■□□□□ 0.22
P04436 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.44■□□□□ 0.22
P04436 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 AC093010.1-201ENST00000473625 1624 ntBASIC16.44■□□□□ 0.22
P04436 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
P04436 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.44■□□□□ 0.22
P04436 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.44■□□□□ 0.22
P04436 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.44■□□□□ 0.22
P04436 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.44■□□□□ 0.22
P04436 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P04436 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P04436 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P04436 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P04436 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms