Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTNP04004 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTNP04004 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTNP04004 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
VTNP04004 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
VTNP04004 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
VTNP04004 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
VTNP04004 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTNP04004 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.71■□□□□ 0.75
VTNP04004 KRT18P67-201ENST00000432816 1264 ntBASIC19.71■□□□□ 0.75
VTNP04004 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.71■□□□□ 0.75
VTNP04004 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.71■□□□□ 0.75
VTNP04004 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VTNP04004 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VTNP04004 AL773604.1-201ENST00000617417 272 ntBASIC19.71■□□□□ 0.75
VTNP04004 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
VTNP04004 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.71■□□□□ 0.75
VTNP04004 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.71■□□□□ 0.75
VTNP04004 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
VTNP04004 AL096828.2-201ENST00000567259 1965 ntBASIC19.71■□□□□ 0.75
VTNP04004 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VTNP04004 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTNP04004 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VTNP04004 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
VTNP04004 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTNP04004 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTNP04004 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTNP04004 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VTNP04004 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTNP04004 KRT8P47-201ENST00000604727 1398 ntBASIC19.7■□□□□ 0.74
VTNP04004 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTNP04004 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTNP04004 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTNP04004 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTNP04004 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.7■□□□□ 0.74
VTNP04004 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.7■□□□□ 0.74
VTNP04004 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTNP04004 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
VTNP04004 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTNP04004 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.7■□□□□ 0.74
VTNP04004 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VTNP04004 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTNP04004 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
VTNP04004 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTNP04004 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTNP04004 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.7■□□□□ 0.74
VTNP04004 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VTNP04004 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTNP04004 RBM17P3-201ENST00000417687 1192 ntBASIC19.7■□□□□ 0.74
VTNP04004 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VTNP04004 AC007967.3-201ENST00000434308 558 ntBASIC19.7■□□□□ 0.74
VTNP04004 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.7■□□□□ 0.74
VTNP04004 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VTNP04004 AP001005.1-201ENST00000571755 1248 ntBASIC19.7■□□□□ 0.74
VTNP04004 AC064862.7-201ENST00000604520 867 ntBASIC19.7■□□□□ 0.74
VTNP04004 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTNP04004 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.7■□□□□ 0.74
VTNP04004 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTNP04004 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VTNP04004 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
VTNP04004 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
VTNP04004 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VTNP04004 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.7■□□□□ 0.74
VTNP04004 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VTNP04004 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VTNP04004 AP005117.1-201ENST00000584346 1413 ntBASIC19.69■□□□□ 0.74
VTNP04004 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VTNP04004 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
VTNP04004 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VTNP04004 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VTNP04004 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.69■□□□□ 0.74
VTNP04004 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VTNP04004 ABCD1P5-201ENST00000445663 754 ntBASIC19.69■□□□□ 0.74
VTNP04004 AF186996.4-201ENST00000467186 377 ntBASIC19.69■□□□□ 0.74
VTNP04004 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
VTNP04004 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.69■□□□□ 0.74
VTNP04004 AC120114.3-201ENST00000611923 658 ntBASIC19.69■□□□□ 0.74
VTNP04004 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
VTNP04004 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VTNP04004 AC135776.1-201ENST00000319817 2481 ntBASIC19.69■□□□□ 0.74
VTNP04004 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.69■□□□□ 0.74
VTNP04004 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
VTNP04004 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.69■□□□□ 0.74
VTNP04004 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
VTNP04004 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTNP04004 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTNP04004 AC004408.2-201ENST00000623613 2777 ntBASIC19.68■□□□□ 0.74
VTNP04004 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTNP04004 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTNP04004 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.68■□□□□ 0.74
VTNP04004 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
VTNP04004 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.68■□□□□ 0.74
VTNP04004 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.68■□□□□ 0.74
VTNP04004 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTNP04004 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.68■□□□□ 0.74
VTNP04004 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.68■□□□□ 0.74
VTNP04004 AL031284.1-201ENST00000419297 478 ntBASIC19.68■□□□□ 0.74
VTNP04004 AL590627.1-203ENST00000421194 1026 ntBASIC19.68■□□□□ 0.74
VTNP04004 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.68■□□□□ 0.74
VTNP04004 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms