Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.05■□□□□ 0.32
MT-ND1P03886 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND1P03886 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MT-ND1P03886 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND1P03886 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
MT-ND1P03886 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.05■□□□□ 0.32
MT-ND1P03886 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND1P03886 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND1P03886 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND1P03886 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.05■□□□□ 0.32
MT-ND1P03886 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.05■□□□□ 0.32
MT-ND1P03886 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND1P03886 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.05■□□□□ 0.32
MT-ND1P03886 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.04■□□□□ 0.32
MT-ND1P03886 KRT8P50-201ENST00000562022 1438 ntBASIC17.04■□□□□ 0.32
MT-ND1P03886 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.04■□□□□ 0.32
MT-ND1P03886 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MT-ND1P03886 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
MT-ND1P03886 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
MT-ND1P03886 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MT-ND1P03886 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MT-ND1P03886 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 AL355312.1-201ENST00000407115 2176 ntBASIC17.04■□□□□ 0.32
MT-ND1P03886 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MT-ND1P03886 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.04■□□□□ 0.32
MT-ND1P03886 FAM201B-201ENST00000458407 597 ntBASIC17.04■□□□□ 0.32
MT-ND1P03886 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.04■□□□□ 0.32
MT-ND1P03886 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.04■□□□□ 0.32
MT-ND1P03886 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MT-ND1P03886 CKBP1-201ENST00000565489 1086 ntBASIC17.04■□□□□ 0.32
MT-ND1P03886 AC130371.2-201ENST00000619443 611 ntBASIC17.04■□□□□ 0.32
MT-ND1P03886 AL359736.2-201ENST00000621992 437 ntBASIC17.04■□□□□ 0.32
MT-ND1P03886 FAM197Y4-202ENST00000622692 608 ntBASIC17.04■□□□□ 0.32
MT-ND1P03886 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.04■□□□□ 0.32
MT-ND1P03886 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
MT-ND1P03886 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MT-ND1P03886 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MT-ND1P03886 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MT-ND1P03886 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
MT-ND1P03886 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MT-ND1P03886 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND1P03886 LINC00602-201ENST00000629776 2065 ntBASIC17.03■□□□□ 0.32
MT-ND1P03886 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND1P03886 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MT-ND1P03886 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.03■□□□□ 0.32
MT-ND1P03886 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND1P03886 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND1P03886 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.03■□□□□ 0.32
MT-ND1P03886 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND1P03886 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND1P03886 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND1P03886 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND1P03886 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
MT-ND1P03886 AC008040.2-201ENST00000461049 708 ntBASIC17.03■□□□□ 0.32
MT-ND1P03886 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.03■□□□□ 0.32
MT-ND1P03886 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.03■□□□□ 0.32
MT-ND1P03886 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MT-ND1P03886 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND1P03886 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND1P03886 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
MT-ND1P03886 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.03■□□□□ 0.32
MT-ND1P03886 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.03■□□□□ 0.32
MT-ND1P03886 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND1P03886 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND1P03886 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND1P03886 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND1P03886 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.03■□□□□ 0.32
MT-ND1P03886 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND1P03886 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.03■□□□□ 0.32
MT-ND1P03886 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND1P03886 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND1P03886 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
MT-ND1P03886 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.02■□□□□ 0.32
MT-ND1P03886 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MT-ND1P03886 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MT-ND1P03886 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
MT-ND1P03886 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MT-ND1P03886 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
MT-ND1P03886 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MT-ND1P03886 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms