Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT6AP02538 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT6AP02538 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.5■□□□□ 0.39
KRT6AP02538 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT6AP02538 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.5■□□□□ 0.39
KRT6AP02538 MIR3917-201ENST00000580971 93 ntBASIC17.5■□□□□ 0.39
KRT6AP02538 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
KRT6AP02538 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
KRT6AP02538 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT6AP02538 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.5■□□□□ 0.39
KRT6AP02538 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
KRT6AP02538 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
KRT6AP02538 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT6AP02538 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT6AP02538 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT6AP02538 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT6AP02538 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
KRT6AP02538 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT6AP02538 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT6AP02538 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT6AP02538 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.49■□□□□ 0.39
KRT6AP02538 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT6AP02538 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT6AP02538 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.49■□□□□ 0.39
KRT6AP02538 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT6AP02538 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.49■□□□□ 0.39
KRT6AP02538 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT6AP02538 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.49■□□□□ 0.39
KRT6AP02538 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT6AP02538 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
KRT6AP02538 LINC00896-202ENST00000609602 2128 ntBASIC17.49■□□□□ 0.39
KRT6AP02538 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
KRT6AP02538 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
KRT6AP02538 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT6AP02538 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.49■□□□□ 0.39
KRT6AP02538 LINC01568-207ENST00000641790 1380 ntBASIC17.49■□□□□ 0.39
KRT6AP02538 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
KRT6AP02538 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT6AP02538 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT6AP02538 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT6AP02538 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT6AP02538 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT6AP02538 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT6AP02538 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
KRT6AP02538 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT6AP02538 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT6AP02538 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT6AP02538 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT6AP02538 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT6AP02538 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.48■□□□□ 0.39
KRT6AP02538 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT6AP02538 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT6AP02538 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT6AP02538 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
KRT6AP02538 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.48■□□□□ 0.39
KRT6AP02538 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT6AP02538 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
KRT6AP02538 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT6AP02538 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT6AP02538 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
KRT6AP02538 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT6AP02538 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
KRT6AP02538 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT6AP02538 DUTP2-201ENST00000519164 463 ntBASIC17.48■□□□□ 0.39
KRT6AP02538 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
KRT6AP02538 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT6AP02538 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
KRT6AP02538 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.48■□□□□ 0.39
KRT6AP02538 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT6AP02538 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT6AP02538 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT6AP02538 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.48■□□□□ 0.39
KRT6AP02538 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
KRT6AP02538 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
KRT6AP02538 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
KRT6AP02538 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 KRT18P22-201ENST00000402024 1347 ntBASIC17.47■□□□□ 0.39
KRT6AP02538 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
KRT6AP02538 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms