Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT1O95170 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CDRT1O95170 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT1O95170 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT1O95170 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.12■□□□□ 0.17
CDRT1O95170 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
CDRT1O95170 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.12■□□□□ 0.17
CDRT1O95170 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDRT1O95170 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CDRT1O95170 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.11■□□□□ 0.17
CDRT1O95170 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CDRT1O95170 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.11■□□□□ 0.17
CDRT1O95170 POU5F1P3-201ENST00000428824 1078 ntBASIC16.11■□□□□ 0.17
CDRT1O95170 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.11■□□□□ 0.17
CDRT1O95170 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
CDRT1O95170 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.11■□□□□ 0.17
CDRT1O95170 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 AL023875.1-201ENST00000640777 796 ntBASIC16.11■□□□□ 0.17
CDRT1O95170 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CDRT1O95170 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.11■□□□□ 0.17
CDRT1O95170 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.11■□□□□ 0.17
CDRT1O95170 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.11■□□□□ 0.17
CDRT1O95170 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.11■□□□□ 0.17
CDRT1O95170 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.11■□□□□ 0.17
CDRT1O95170 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.11■□□□□ 0.17
CDRT1O95170 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.11■□□□□ 0.17
CDRT1O95170 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.11■□□□□ 0.17
CDRT1O95170 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
CDRT1O95170 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT1O95170 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT1O95170 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
CDRT1O95170 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
CDRT1O95170 RCC2P3-201ENST00000418112 1537 ntBASIC16.1■□□□□ 0.17
CDRT1O95170 KRT18P55-202ENST00000578578 1546 ntBASIC16.1■□□□□ 0.17
CDRT1O95170 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT1O95170 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT1O95170 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT1O95170 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT1O95170 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT1O95170 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
CDRT1O95170 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.1■□□□□ 0.17
CDRT1O95170 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT1O95170 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT1O95170 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT1O95170 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDRT1O95170 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.1■□□□□ 0.17
CDRT1O95170 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT1O95170 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.1■□□□□ 0.17
CDRT1O95170 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT1O95170 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.1■□□□□ 0.17
CDRT1O95170 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.1■□□□□ 0.17
CDRT1O95170 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.1■□□□□ 0.17
CDRT1O95170 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.1■□□□□ 0.17
CDRT1O95170 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
CDRT1O95170 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.1■□□□□ 0.17
CDRT1O95170 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT1O95170 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.1■□□□□ 0.17
CDRT1O95170 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT1O95170 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT1O95170 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT1O95170 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT1O95170 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT1O95170 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
CDRT1O95170 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT1O95170 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.1■□□□□ 0.17
CDRT1O95170 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CDRT1O95170 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.1■□□□□ 0.17
CDRT1O95170 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT1O95170 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT1O95170 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT1O95170 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT1O95170 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.09■□□□□ 0.17
CDRT1O95170 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDRT1O95170 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT1O95170 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT1O95170 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT1O95170 AL355312.1-201ENST00000407115 2176 ntBASIC16.09■□□□□ 0.17
CDRT1O95170 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDRT1O95170 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.09■□□□□ 0.17
CDRT1O95170 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms