Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 FAM197Y4-202ENST00000622692 608 ntBASIC20.64■□□□□ 0.89
GADD45BO75293 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
GADD45BO75293 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.64■□□□□ 0.89
GADD45BO75293 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GADD45BO75293 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.64■□□□□ 0.89
GADD45BO75293 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GADD45BO75293 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
GADD45BO75293 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GADD45BO75293 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GADD45BO75293 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GADD45BO75293 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GADD45BO75293 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GADD45BO75293 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.63■□□□□ 0.89
GADD45BO75293 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GADD45BO75293 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GADD45BO75293 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.63■□□□□ 0.89
GADD45BO75293 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
GADD45BO75293 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
GADD45BO75293 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GADD45BO75293 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GADD45BO75293 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
GADD45BO75293 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.63■□□□□ 0.89
GADD45BO75293 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.63■□□□□ 0.89
GADD45BO75293 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.63■□□□□ 0.89
GADD45BO75293 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.63■□□□□ 0.89
GADD45BO75293 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.63■□□□□ 0.89
GADD45BO75293 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.63■□□□□ 0.89
GADD45BO75293 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.63■□□□□ 0.89
GADD45BO75293 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
GADD45BO75293 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
GADD45BO75293 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GADD45BO75293 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
GADD45BO75293 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GADD45BO75293 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
GADD45BO75293 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.63■□□□□ 0.89
GADD45BO75293 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GADD45BO75293 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
GADD45BO75293 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
GADD45BO75293 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GADD45BO75293 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GADD45BO75293 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
GADD45BO75293 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
GADD45BO75293 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GADD45BO75293 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GADD45BO75293 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GADD45BO75293 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GADD45BO75293 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GADD45BO75293 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
GADD45BO75293 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
GADD45BO75293 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
GADD45BO75293 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GADD45BO75293 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GADD45BO75293 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GADD45BO75293 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GADD45BO75293 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.62■□□□□ 0.89
GADD45BO75293 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GADD45BO75293 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.62■□□□□ 0.89
GADD45BO75293 AC104390.1-201ENST00000555663 520 ntBASIC20.62■□□□□ 0.89
GADD45BO75293 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.62■□□□□ 0.89
GADD45BO75293 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GADD45BO75293 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GADD45BO75293 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GADD45BO75293 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.62■□□□□ 0.89
GADD45BO75293 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
GADD45BO75293 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.62■□□□□ 0.89
GADD45BO75293 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GADD45BO75293 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GADD45BO75293 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
GADD45BO75293 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GADD45BO75293 KRT8P7-201ENST00000533003 1432 ntBASIC20.61■□□□□ 0.89
GADD45BO75293 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GADD45BO75293 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.61■□□□□ 0.89
GADD45BO75293 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.61■□□□□ 0.89
GADD45BO75293 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GADD45BO75293 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GADD45BO75293 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GADD45BO75293 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
GADD45BO75293 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GADD45BO75293 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.61■□□□□ 0.89
GADD45BO75293 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.61■□□□□ 0.89
GADD45BO75293 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GADD45BO75293 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
GADD45BO75293 WWOX-216ENST00000569818 525 ntBASIC20.61■□□□□ 0.89
GADD45BO75293 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.61■□□□□ 0.89
GADD45BO75293 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GADD45BO75293 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.61■□□□□ 0.89
GADD45BO75293 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.61■□□□□ 0.89
GADD45BO75293 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
GADD45BO75293 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GADD45BO75293 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
GADD45BO75293 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GADD45BO75293 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.6■□□□□ 0.89
GADD45BO75293 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
GADD45BO75293 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GADD45BO75293 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
GADD45BO75293 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
GADD45BO75293 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GADD45BO75293 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GADD45BO75293 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GADD45BO75293 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms