Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.78■□□□□ 0.28
PRKNO60260 AC090616.6-201ENST00000582640 721 ntBASIC16.78■□□□□ 0.28
PRKNO60260 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.78■□□□□ 0.28
PRKNO60260 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKNO60260 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKNO60260 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKNO60260 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKNO60260 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.78■□□□□ 0.28
PRKNO60260 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKNO60260 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PRKNO60260 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRKNO60260 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
PRKNO60260 AP000997.3-201ENST00000623333 2250 ntBASIC16.77■□□□□ 0.28
PRKNO60260 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRKNO60260 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.77■□□□□ 0.28
PRKNO60260 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRKNO60260 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRKNO60260 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PRKNO60260 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRKNO60260 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PRKNO60260 LINC00265-3P-201ENST00000447588 903 ntBASIC16.77■□□□□ 0.28
PRKNO60260 TOB2P1-201ENST00000469761 992 ntBASIC16.77■□□□□ 0.28
PRKNO60260 AC091607.1-201ENST00000490318 1060 ntBASIC16.77■□□□□ 0.28
PRKNO60260 GUSBP12-201ENST00000513727 720 ntBASIC16.77■□□□□ 0.28
PRKNO60260 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.77■□□□□ 0.28
PRKNO60260 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PRKNO60260 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.77■□□□□ 0.28
PRKNO60260 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.77■□□□□ 0.28
PRKNO60260 AC008687.5-201ENST00000593746 558 ntBASIC16.77■□□□□ 0.28
PRKNO60260 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRKNO60260 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRKNO60260 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.77■□□□□ 0.28
PRKNO60260 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRKNO60260 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRKNO60260 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PRKNO60260 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.77■□□□□ 0.27
PRKNO60260 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRKNO60260 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PRKNO60260 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.77■□□□□ 0.27
PRKNO60260 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRKNO60260 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.27
PRKNO60260 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.77■□□□□ 0.27
PRKNO60260 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
PRKNO60260 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.76■□□□□ 0.27
PRKNO60260 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.76■□□□□ 0.27
PRKNO60260 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PRKNO60260 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PRKNO60260 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.76■□□□□ 0.27
PRKNO60260 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
PRKNO60260 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.76■□□□□ 0.27
PRKNO60260 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.76■□□□□ 0.27
PRKNO60260 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.76■□□□□ 0.27
PRKNO60260 CLEC4GP1-201ENST00000596555 870 ntBASIC16.76■□□□□ 0.27
PRKNO60260 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PRKNO60260 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.76■□□□□ 0.27
PRKNO60260 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PRKNO60260 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.76■□□□□ 0.27
PRKNO60260 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.76■□□□□ 0.27
PRKNO60260 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PRKNO60260 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.76■□□□□ 0.27
PRKNO60260 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
PRKNO60260 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRKNO60260 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PRKNO60260 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRKNO60260 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PRKNO60260 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRKNO60260 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRKNO60260 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.75■□□□□ 0.27
PRKNO60260 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRKNO60260 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.75■□□□□ 0.27
PRKNO60260 TSPY12P-201ENST00000421279 868 ntBASIC16.75■□□□□ 0.27
PRKNO60260 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.75■□□□□ 0.27
PRKNO60260 AP000867.3-201ENST00000524675 377 ntBASIC16.75■□□□□ 0.27
PRKNO60260 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
PRKNO60260 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.75■□□□□ 0.27
PRKNO60260 AP005901.3-202ENST00000581653 237 ntBASIC16.75■□□□□ 0.27
PRKNO60260 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.75■□□□□ 0.27
PRKNO60260 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms